G1933702


Basic Information

Item Value
gene id G1933702
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 42876894 ~ 42877720 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2212017
gggacatagaggttgcctctgtccaaggttggatacaccatgctaggagatacttccctccatgtggggacatagaggttgtctctgtccaaggttggatacaccatgctaggagatacttccctccatgtggggacatagaggttgcctctgtccaaggttggatacgccatgctaggagatacttccctccatgtggggacatagaggttgcctctgtccaaggttggacacgtcatgctaggagatacttccctccatgtggggacatagaggttgtctctgtccaaggttggatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2212017 True 300 lncRNA 0.52 3 42876894 42877720

Neighbor

gene id symbol gene type direction distance location
prdm10 prdm10 coding upstream 91734 42723531 ~ 42785160 (+)
LOC110503413 LOC106613251 coding upstream 541424 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 798164 42023482 ~ 42078730 (+)
LOC118944044 NA coding upstream 1609615 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 1751516 41012678 ~ 41125378 (+)
cdon LOC106613390 coding downstream 188567 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 421808 43299528 ~ 43420475 (+)
ddx6 ddx6 coding downstream 562293 43440013 ~ 43465245 (+)
treh treh coding downstream 595004 43472724 ~ 43491902 (+)
G1933673 NA non-coding upstream 95826 42780771 ~ 42781068 (+)
G1933670 NA non-coding upstream 97983 42778097 ~ 42778911 (+)
G1933662 NA non-coding upstream 121920 42754561 ~ 42754974 (+)
G1933655 NA non-coding upstream 133687 42742417 ~ 42743207 (+)
G1933654 NA non-coding upstream 135300 42741302 ~ 42741594 (+)
G1933716 NA non-coding downstream 49340 42927060 ~ 42931949 (+)
G1933729 NA non-coding downstream 98714 42976434 ~ 42976737 (+)
G1933934 NA non-coding downstream 121158 42998878 ~ 42999078 (+)
G1933935 NA non-coding downstream 123903 43001623 ~ 43001872 (+)
G1933938 NA non-coding downstream 126474 43004194 ~ 43004629 (+)
G1933574 NA other upstream 341911 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 375904 42495580 ~ 42500990 (+)
G1933255 NA other upstream 486633 42389427 ~ 42390261 (+)
G1933231 LOC106581444 other upstream 511634 42361256 ~ 42365260 (+)
G1933999 NA other downstream 280383 43158103 ~ 43158566 (+)
G1934201 NA other downstream 555728 43433448 ~ 43435352 (+)
G1935694 NA other downstream 2222582 45100302 ~ 45103958 (+)
G1935696 NA other downstream 2226412 45104132 ~ 45104500 (+)
G1935897 NA other downstream 2410790 45288510 ~ 45289135 (+)

Expression


Co-expression Network