Gene
RNA
| Item | Value |
|---|---|
| gene id | G1933945 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 43021291 ~ 43035220 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2212322 | True | 352 | lncRNA | 0.47 | 2 | 43021291 | 43035220 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| aplp2 | LOC102785027 | coding | downstream | 347508 | 42532534 ~ 42673783 (-) |
| LOC110503214 | LOC106581444 | coding | downstream | 650696 | 42358000 ~ 42370595 (-) |
| LOC110490901 | LOC106613249 | coding | downstream | 805505 | 42190618 ~ 42215786 (-) |
| LOC110489559 | LOC106613248 | coding | downstream | 899454 | 42111669 ~ 42121837 (-) |
| LOC110489558 | LOC106613247 | coding | downstream | 910638 | 42090565 ~ 42170024 (-) |
| LOC118944083 | NA | coding | upstream | 183854 | 43219074 ~ 43223984 (-) |
| LOC110503290 | LOC106613395 | coding | upstream | 398906 | 43434126 ~ 43439279 (-) |
| LOC118944046 | NA | coding | upstream | 467081 | 43502301 ~ 43504650 (-) |
| LOC118944047 | NA | coding | upstream | 614186 | 43649406 ~ 43650309 (-) |
| LOC118944048 | NA | coding | upstream | 617573 | 43652793 ~ 43654707 (-) |
| G1933940 | NA | non-coding | downstream | 14978 | 43005841 ~ 43006313 (-) |
| G1933868 | NA | non-coding | downstream | 38414 | 42784830 ~ 42982877 (-) |
| G1933930 | NA | non-coding | downstream | 46364 | 42974160 ~ 42974927 (-) |
| G1933900 | NA | non-coding | downstream | 143524 | 42876893 ~ 42877767 (-) |
| G1933849 | NA | non-coding | downstream | 157602 | 42754274 ~ 42863689 (-) |
| G1934066 | NA | non-coding | upstream | 94015 | 43129235 ~ 43130426 (-) |
| G1934092 | NA | non-coding | upstream | 145140 | 43180360 ~ 43180774 (-) |
| G1934095 | NA | non-coding | upstream | 148333 | 43183553 ~ 43252286 (-) |
| G1934098 | NA | non-coding | upstream | 153507 | 43188727 ~ 43199207 (-) |
| G1934099 | NA | non-coding | upstream | 153822 | 43189042 ~ 43191450 (-) |
| G1933529 | NA | other | downstream | 620964 | 42399897 ~ 42400327 (-) |
| G1933401 | NA | other | downstream | 945352 | 42073127 ~ 42075939 (-) |
| LOC118944009 | LOC106613246 | other | downstream | 1017863 | 41988723 ~ 42023238 (-) |
| G1932422 | NA | other | downstream | 1864558 | 41156371 ~ 41156733 (-) |
| G1931785 | NA | other | downstream | 2555424 | 40465620 ~ 40465867 (-) |
| G1934061 | NA | other | upstream | 84745 | 43119965 ~ 43153967 (-) |
| G1934102 | NA | other | upstream | 164153 | 43199373 ~ 43199815 (-) |
| G1935283 | NA | other | upstream | 1222076 | 44257296 ~ 44258661 (-) |
| G1935421 | NA | other | upstream | 1485935 | 44521155 ~ 44521439 (-) |
| G1935467 | NA | other | upstream | 1543802 | 44579022 ~ 44585392 (-) |
