G1934413


Basic Information

Item Value
gene id G1934413
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 43661078 ~ 43662273 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2212956
ctgctgctactctgtttattatctatgcataggcactttaactctacctacatgtacatattacctcaattacctggactaacggtacccctgcacattgactctgtaccgtaacaccctgtatatagtctccacattgactctgtaccgtaacaccctgtatatagtctccacattgactctgtaccgtaacaccctgtatatattctccacattgactctgtaccgtaataccctgtatatagtctccacattgactttgtaccggtacaccctgtatatagtctccacattgactctgtaccgataccccctgtatatagcctccacattgactctctaccggtacaccctgtatatagtctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccgtaataccctgtatatagcctccacattgactctataccgtaataccctgtatatagtctccacattgactctgtaccgtaacaccctgtatatagcctccacattgactctgtaccgtaataccctgtatatagcctccacattgactctgtaccgtaataccctgtatatagtctcgctattgttatttttctgCTGCTGTTGAATTATTTGTTGCTTGTTTTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2212956 True 649 lncRNA 0.42 2 43661078 43662273
Loading

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 169176 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 195833 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 240603 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 448366 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 875918 42723531 ~ 42785160 (+)
G1934407 NA non-coding upstream 19001 43640209 ~ 43642077 (+)
G1934400 NA non-coding upstream 45848 43615028 ~ 43615230 (+)
G1934245 NA non-coding upstream 73881 43586741 ~ 43587197 (+)
G1934242 NA non-coding upstream 81287 43576675 ~ 43579791 (+)
G1934195 NA non-coding upstream 189575 43469523 ~ 43471503 (+)
G1934437 NA non-coding downstream 5028 43667301 ~ 43667518 (+)
G1934448 NA non-coding downstream 14171 43676444 ~ 43677127 (+)
G1934463 NA non-coding downstream 35506 43697779 ~ 43698417 (+)
G1934519 NA non-coding downstream 67947 43730220 ~ 43730438 (+)
G1934521 NA non-coding downstream 68908 43731181 ~ 43731418 (+)
G1934201 NA other upstream 225726 43433448 ~ 43435352 (+)
G1933999 NA other upstream 502512 43158103 ~ 43158566 (+)
G1933574 NA other upstream 1126095 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 1160088 42495580 ~ 42500990 (+)
G1933255 NA other upstream 1270817 42389427 ~ 42390261 (+)
G1935694 NA other downstream 1438029 45100302 ~ 45103958 (+)
G1935696 NA other downstream 1441859 45104132 ~ 45104500 (+)
G1935897 NA other downstream 1626237 45288510 ~ 45289135 (+)
G1936028 NA other downstream 1823070 45485343 ~ 45492999 (+)
G1936029 NA other downstream 1823463 45485736 ~ 45487871 (+)

Expression

G1934413 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
End of interactive chart.

G1934413 Expression in each Bioproject

Bar chart with 19 bars.
G1934413 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network