Gene
RNA
| Item | Value |
|---|---|
| gene id | G1934443 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 43671431 ~ 43671878 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ORF2 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2212988 | True | 448 | lncRNA | 0.41 | 1 | 43671431 | 43671878 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944048 | NA | coding | downstream | 16724 | 43652793 ~ 43654707 (-) |
| LOC118944047 | NA | coding | downstream | 21122 | 43649406 ~ 43650309 (-) |
| LOC118944046 | NA | coding | downstream | 166781 | 43502301 ~ 43504650 (-) |
| LOC110503290 | LOC106613395 | coding | downstream | 232152 | 43434126 ~ 43439279 (-) |
| LOC118944083 | NA | coding | downstream | 447447 | 43219074 ~ 43223984 (-) |
| LOC118943990 | nectin1 | coding | upstream | 654910 | 44326788 ~ 44898432 (-) |
| LOC118943991 | NA | coding | upstream | 921579 | 44593457 ~ 44595644 (-) |
| LOC110503298 | yap1 | coding | upstream | 1629436 | 45301314 ~ 45370352 (-) |
| LOC118944063 | NA | coding | upstream | 1662243 | 45334121 ~ 45336972 (-) |
| LOC110503441 | cntn5 | coding | upstream | 1899200 | 45571078 ~ 45883165 (-) |
| G1934418 | NA | non-coding | downstream | 47238 | 43623137 ~ 43624193 (-) |
| G1934401 | NA | non-coding | downstream | 55867 | 43615315 ~ 43615564 (-) |
| G1934384 | NA | non-coding | downstream | 80255 | 43590805 ~ 43591176 (-) |
| G1934382 | NA | non-coding | downstream | 81845 | 43588223 ~ 43589586 (-) |
| G1934356 | NA | non-coding | downstream | 177588 | 43492604 ~ 43493843 (-) |
| G1934552 | NA | non-coding | upstream | 74323 | 43746201 ~ 43795994 (-) |
| G1934594 | NA | non-coding | upstream | 139436 | 43811314 ~ 43811530 (-) |
| G1934595 | NA | non-coding | upstream | 139663 | 43811541 ~ 43811756 (-) |
| G1934604 | NA | non-coding | upstream | 144827 | 43816705 ~ 43817152 (-) |
| G1934606 | NA | non-coding | upstream | 147540 | 43819418 ~ 43819702 (-) |
| G1934102 | NA | other | downstream | 471616 | 43199373 ~ 43199815 (-) |
| G1934061 | NA | other | downstream | 517464 | 43119965 ~ 43153967 (-) |
| G1933529 | NA | other | downstream | 1271104 | 42399897 ~ 42400327 (-) |
| G1933401 | NA | other | downstream | 1595492 | 42073127 ~ 42075939 (-) |
| LOC118944009 | LOC106613246 | other | downstream | 1668003 | 41988723 ~ 42023238 (-) |
| G1935283 | NA | other | upstream | 585418 | 44257296 ~ 44258661 (-) |
| G1935421 | NA | other | upstream | 849277 | 44521155 ~ 44521439 (-) |
| G1935467 | NA | other | upstream | 907144 | 44579022 ~ 44585392 (-) |
| G1935978 | NA | other | upstream | 1724154 | 45396032 ~ 45397761 (-) |
