G1934628


Basic Information

Item Value
gene id G1934628
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 43855764 ~ 43855983 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213202
TCTTTACTGTGTGTCTGAACTAGTGAGGTAATGGTTGTGTCCactgtgtctgtttgtctttactgtgtgtctGAACTAGTGAAGTAATGGTTGTGTCCACTGTATCTGtttgtctttactgtgtgtctGAACTAGTGAGGTAATGGTTGTGTCCACTGTATCTGtttgtctttactgtgtgtctGAACTAGTGAGGTAATGGTTGTGTCCactgtgtctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213202 True 220 lncRNA 0.42 1 43855764 43855983

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 363862 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 390519 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 435289 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 643052 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 1070604 42723531 ~ 42785160 (+)
G1934618 NA non-coding upstream 14687 43840828 ~ 43841077 (+)
G1934614 NA non-coding upstream 24332 43831130 ~ 43831432 (+)
G1934612 NA non-coding upstream 27429 43827589 ~ 43828335 (+)
G1934551 NA non-coding upstream 60282 43793203 ~ 43795482 (+)
G1934521 NA non-coding upstream 124346 43731181 ~ 43731418 (+)
G1934658 NA non-coding downstream 125618 43981601 ~ 43981820 (+)
G1934662 NA non-coding downstream 127799 43983782 ~ 43984019 (+)
G1934663 NA non-coding downstream 128043 43984026 ~ 43984281 (+)
G1934668 NA non-coding downstream 133895 43989878 ~ 43990121 (+)
G1934681 NA non-coding downstream 156272 44012255 ~ 44018654 (+)
G1934201 NA other upstream 420412 43433448 ~ 43435352 (+)
G1933999 NA other upstream 697198 43158103 ~ 43158566 (+)
G1933574 NA other upstream 1320781 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 1354774 42495580 ~ 42500990 (+)
G1933255 NA other upstream 1465503 42389427 ~ 42390261 (+)
G1935694 NA other downstream 1244319 45100302 ~ 45103958 (+)
G1935696 NA other downstream 1248149 45104132 ~ 45104500 (+)
G1935897 NA other downstream 1432527 45288510 ~ 45289135 (+)
G1936028 NA other downstream 1629360 45485343 ~ 45492999 (+)
G1936029 NA other downstream 1629753 45485736 ~ 45487871 (+)

Expression


Co-expression Network