G1934645


Basic Information

Item Value
gene id G1934645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 43867268 ~ 43876029 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213221
gaatagactggatgaggctgtaggaacagagtgaatagactggatgaggctgtaggaacagagtgaacagactggatgaggctgtaggagcagagtgaatagactggatgaggctgtaggaacagactggatgagacTGTAGGAACAgattgaatagactggatgaggctgtaggaacatagtgaatagactggatgaggctgtaggaacagagtgaacagactggatgaggctgtatgaatagactggatgaggctgtaggaacagagtgaatagagtggatgaggctgtaggatcagagtgaatagactggatgaggctgtatgaacagactggatgaggctgtaggaacagagtgaatagactggatgaggctgtaggaacagagtgaacagactggatgaggctgtaggagcagagtgaatatactggatgaggctgtatgaacagactggatgatgctgtaggaacagagtgaatagactggatgaggctgtaggaacagactggatgaggctgtaggaacagagtgaatagactggatgaggatgtaggagcagagtgaatagactggatgaggctgtaggaacagagtgaatagactggatgaggctgtaggaacagagtgaatagactggatgaggctgtaggagcagagtgaatagactggatgaggctgtaggagcagagtgaatatactggatgaggctgtaggaacagactggatgaggctgtaggaacagagtgaatagactggatgaggctgtaggagcagagtgaatagactggatgaggctgtaggagcagagtgaat

Function

NR:

description
PREDICTED: uncharacterized protein LOC106612170, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213221 True 814 lncRNA 0.48 3 43867268 43876029

Neighbor

gene id symbol gene type direction distance location
LOC118944048 NA coding downstream 212561 43652793 ~ 43654707 (-)
LOC118944047 NA coding downstream 216959 43649406 ~ 43650309 (-)
LOC118944046 NA coding downstream 362618 43502301 ~ 43504650 (-)
LOC110503290 LOC106613395 coding downstream 427989 43434126 ~ 43439279 (-)
LOC118944083 NA coding downstream 643284 43219074 ~ 43223984 (-)
LOC118943990 nectin1 coding upstream 450759 44326788 ~ 44898432 (-)
LOC118943991 NA coding upstream 717428 44593457 ~ 44595644 (-)
LOC110503298 yap1 coding upstream 1425285 45301314 ~ 45370352 (-)
LOC118944063 NA coding upstream 1458092 45334121 ~ 45336972 (-)
LOC110503441 cntn5 coding upstream 1695049 45571078 ~ 45883165 (-)
G1934613 NA non-coding downstream 38705 43827802 ~ 43828563 (-)
G1934606 NA non-coding downstream 47566 43819418 ~ 43819702 (-)
G1934604 NA non-coding downstream 50116 43816705 ~ 43817152 (-)
G1934595 NA non-coding downstream 55512 43811541 ~ 43811756 (-)
G1934594 NA non-coding downstream 55738 43811314 ~ 43811530 (-)
G1934649 NA non-coding upstream 5850 43881879 ~ 43883864 (-)
G1934650 NA non-coding upstream 40938 43916967 ~ 43975854 (-)
G1934667 NA non-coding upstream 111324 43987353 ~ 43987902 (-)
G1934670 NA non-coding upstream 114701 43990730 ~ 43991232 (-)
G1934679 NA non-coding upstream 128892 44004921 ~ 44005175 (-)
G1934102 NA other downstream 667453 43199373 ~ 43199815 (-)
G1934061 NA other downstream 713301 43119965 ~ 43153967 (-)
G1933529 NA other downstream 1466941 42399897 ~ 42400327 (-)
G1933401 NA other downstream 1791329 42073127 ~ 42075939 (-)
LOC118944009 LOC106613246 other downstream 1863840 41988723 ~ 42023238 (-)
G1935283 NA other upstream 381267 44257296 ~ 44258661 (-)
G1935421 NA other upstream 645126 44521155 ~ 44521439 (-)
G1935467 NA other upstream 702993 44579022 ~ 44585392 (-)
G1935978 NA other upstream 1520003 45396032 ~ 45397761 (-)

Expression


Co-expression Network