G1934662


Basic Information

Item Value
gene id G1934662
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 43983782 ~ 43984019 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213240
tcctgtctcagcctccagtatttatgctgcagtagtttatgtgtcggggggctagggtcagtttgttttatctggagtacttctcctgtcctattcggtgtcctgtgtgaatctaagtgtgcgttctctaattctctccttctctctttctttctctctctcggaggacctgagccctaggaccatgccccaagactacctgacatgatgactccttgctgtccccagtccacctggc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213240 True 238 lncRNA 0.50 1 43983782 43984019

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 491880 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 518537 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 563307 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 771070 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 1198622 42723531 ~ 42785160 (+)
G1934658 NA non-coding upstream 1962 43981601 ~ 43981820 (+)
G1934628 NA non-coding upstream 127799 43855764 ~ 43855983 (+)
G1934618 NA non-coding upstream 142705 43840828 ~ 43841077 (+)
G1934614 NA non-coding upstream 152350 43831130 ~ 43831432 (+)
G1934612 NA non-coding upstream 155447 43827589 ~ 43828335 (+)
G1934663 NA non-coding downstream 7 43984026 ~ 43984281 (+)
G1934668 NA non-coding downstream 5859 43989878 ~ 43990121 (+)
G1934681 NA non-coding downstream 28236 44012255 ~ 44018654 (+)
G1934695 NA non-coding downstream 48331 44032350 ~ 44032584 (+)
G1934697 NA non-coding downstream 49078 44033097 ~ 44033543 (+)
G1934201 NA other upstream 548430 43433448 ~ 43435352 (+)
G1933999 NA other upstream 825216 43158103 ~ 43158566 (+)
G1933574 NA other upstream 1448799 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 1482792 42495580 ~ 42500990 (+)
G1933255 NA other upstream 1593521 42389427 ~ 42390261 (+)
G1935694 NA other downstream 1116283 45100302 ~ 45103958 (+)
G1935696 NA other downstream 1120113 45104132 ~ 45104500 (+)
G1935897 NA other downstream 1304491 45288510 ~ 45289135 (+)
G1936028 NA other downstream 1501324 45485343 ~ 45492999 (+)
G1936029 NA other downstream 1501717 45485736 ~ 45487871 (+)

Expression


Co-expression Network