G1934754


Basic Information

Item Value
gene id G1934754
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 44169354 ~ 44176087 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213352
acctttactagtcctctattactagtcctataATAACAGACctatactagtcctgtattaacagacctttactagtcctatattaacagacCTATTCTAGTCatatattaacagacctttactagtcctgtattaacagacctttactagtcctgtattagaggacctttactagtcctgtattaacagacctttactagtcctgtattaacagacctttactagtcctgtattactagtcctatattaacagacctttattagtcctgtattaatagGCCTTTACtactcctgtattagaggacctttactagtcctgtattaacagaccttaactagtcctgtattaacagacctttactagtcctgtattaacatacctttactagtcctgtattagaggacctttactagtcctgtattaacagacctttactagtcctgtattaacagacatttactagtcctgtattaacatacctttacaagtcctgtattaacatacctttactagtcctgtattagaggacctttactagtcctgtattaacagacctttactagtcctttattaacagacctttaatagtcctgtattaacatacctttactagtcctgtattagaggacctttactagtcctgtattaacagacctttactagtcctgtattactagtcctgtattaacagacctttactagtcctgtattaacagacctttactagtcctgtattaacagacatttactagtcctgtattagaggacctttactagtcctgtattagaggacctttactagtcctgtattacaggacctttactagtcctgtattaacagacctttactagtcctgtattactagtcctgtattaacagacctttactagtcctgtattactagtcctgtattaacagacctttactagtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213352 True 933 lncRNA 0.35 2 44169354 44176087

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 677452 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 704109 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 748879 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 956642 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 1384194 42723531 ~ 42785160 (+)
G1934703 NA non-coding upstream 125665 44043366 ~ 44043689 (+)
G1934701 NA non-coding upstream 126820 44042086 ~ 44042534 (+)
G1934697 NA non-coding upstream 135811 44033097 ~ 44033543 (+)
G1934695 NA non-coding upstream 136770 44032350 ~ 44032584 (+)
G1934681 NA non-coding upstream 150700 44012255 ~ 44018654 (+)
G1934851 NA non-coding downstream 52236 44228323 ~ 44228796 (+)
G1934869 NA non-coding downstream 62866 44238953 ~ 44239467 (+)
G1934879 NA non-coding downstream 69070 44245157 ~ 44246263 (+)
G1934888 NA non-coding downstream 74229 44250316 ~ 44250551 (+)
G1934895 NA non-coding downstream 81228 44257315 ~ 44258572 (+)
G1934201 NA other upstream 734002 43433448 ~ 43435352 (+)
G1933999 NA other upstream 1010788 43158103 ~ 43158566 (+)
G1933574 NA other upstream 1634371 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 1668364 42495580 ~ 42500990 (+)
G1933255 NA other upstream 1779093 42389427 ~ 42390261 (+)
G1935694 NA other downstream 924215 45100302 ~ 45103958 (+)
G1935696 NA other downstream 928045 45104132 ~ 45104500 (+)
G1935897 NA other downstream 1112423 45288510 ~ 45289135 (+)
G1936028 NA other downstream 1309256 45485343 ~ 45492999 (+)
G1936029 NA other downstream 1309649 45485736 ~ 45487871 (+)

Expression


Co-expression Network