G1934879


Basic Information

Item Value
gene id G1934879
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 44245157 ~ 44246263 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213502
TGTTTCTAGCATACAGTGTTCAGCTACATACTCtgattggaagctggggatgatgaGGTGGCCATGGCAGAGACCCTTACCTCTAAAAGTAAAGCACTATGTTTCCTATCCTTCTCTACTGCCGTTCATCCATAATGGAGATCAGTACATGACTAGAAAGATTCATATGAAAATAGTACCGCTTCAAATATGAAAGGGGAACTCTCAATAATACAACCCTCCTGTACAACTGGTATCTATAGGCTGTGGAACATGTTGTAAAGCTGGTATCTATAGACTGTGGAACATGTTGTAAAGCTGGTATCTATAGGCTGTGGAACATGTTGTAAAGCTGGTATCTATAGACTGTGGAACATGTTGTAAAGCTGGTATCTAAAGGCTGTGGAACATGTTGTAAAGCTGGTATCTATAGACTGTGGAACATGTTGTAAAGCTGGTATCTATAGGCTGTGGAACATGTTGTAAAGCTGGTATCTATAGACTGTGGAACATGTTGTAAAGCTGGTATCTATAGACTGTGGAACATGTTGTAAAGCTGGTATCTATAGGCTGTGGAACATGTTGTTGTATCTCCTGCTGTAAAGCTGGTATCTTTTGATCTTCCTGAATCAGAATCAGATGCTCAATGACTTCATAATCAGTTCCAAAACTGTCaacctcagacacacacacactcactcagacacacacacactcacactcacactcacacacattacCAATACTGTCAACATCAAACATGAGCGCCCCTCCCTCCGTGTTGATTTCTTATTGCTTGAGAAACTCAGTGGCAGTTTGAAGCAGTTTGTTCAGTTTAATCATGATTAGTCAAGGAACTACACTCACAAACACCCTGACTGCTGAAGAAATTATAGAAACATTTCTCAGCGTGCAGTAAATATTGACTACATCGTCTAATTCTTATTCTACAGGTTGATCAACATGATaagacatttgtgtgtgtgtgtgtgtgtgttttcatcgGCATCTAAGTGTATTACGTATGACCAGCATagagttaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213502 True 1073 lncRNA 0.41 2 44245157 44246263

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 753255 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 779912 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 824682 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 1032445 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 1459997 42723531 ~ 42785160 (+)
G1934869 NA non-coding upstream 5690 44238953 ~ 44239467 (+)
G1934851 NA non-coding upstream 16361 44228323 ~ 44228796 (+)
G1934754 NA non-coding upstream 69070 44169354 ~ 44176087 (+)
G1934703 NA non-coding upstream 201468 44043366 ~ 44043689 (+)
G1934701 NA non-coding upstream 202623 44042086 ~ 44042534 (+)
G1934888 NA non-coding downstream 4053 44250316 ~ 44250551 (+)
G1934895 NA non-coding downstream 11052 44257315 ~ 44258572 (+)
G1934899 NA non-coding downstream 21517 44267780 ~ 44268011 (+)
G1934904 NA non-coding downstream 26967 44273230 ~ 44284819 (+)
G1934918 NA non-coding downstream 62154 44308417 ~ 44308639 (+)
G1934201 NA other upstream 809805 43433448 ~ 43435352 (+)
G1933999 NA other upstream 1086591 43158103 ~ 43158566 (+)
G1933574 NA other upstream 1710174 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 1744167 42495580 ~ 42500990 (+)
G1933255 NA other upstream 1854896 42389427 ~ 42390261 (+)
G1935694 NA other downstream 854039 45100302 ~ 45103958 (+)
G1935696 NA other downstream 857869 45104132 ~ 45104500 (+)
G1935897 NA other downstream 1042247 45288510 ~ 45289135 (+)
G1936028 NA other downstream 1239080 45485343 ~ 45492999 (+)
G1936029 NA other downstream 1239473 45485736 ~ 45487871 (+)

Expression


Co-expression Network