Gene
RNA
| Item | Value |
|---|---|
| gene id | G1935307 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 44307257 ~ 44307475 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2214046 | True | 219 | lncRNA | 0.42 | 1 | 44307257 | 44307475 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944048 | NA | coding | downstream | 652550 | 43652793 ~ 43654707 (-) |
| LOC118944047 | NA | coding | downstream | 656948 | 43649406 ~ 43650309 (-) |
| LOC118944046 | NA | coding | downstream | 802607 | 43502301 ~ 43504650 (-) |
| LOC110503290 | LOC106613395 | coding | downstream | 867978 | 43434126 ~ 43439279 (-) |
| LOC118944083 | NA | coding | downstream | 1083273 | 43219074 ~ 43223984 (-) |
| LOC118943990 | nectin1 | coding | upstream | 19313 | 44326788 ~ 44898432 (-) |
| LOC118943991 | NA | coding | upstream | 285982 | 44593457 ~ 44595644 (-) |
| LOC110503298 | yap1 | coding | upstream | 993839 | 45301314 ~ 45370352 (-) |
| LOC118944063 | NA | coding | upstream | 1026646 | 45334121 ~ 45336972 (-) |
| LOC110503441 | cntn5 | coding | upstream | 1263603 | 45571078 ~ 45883165 (-) |
| G1934885 | NA | non-coding | downstream | 59028 | 44247944 ~ 44248229 (-) |
| G1934874 | NA | non-coding | downstream | 64454 | 44242584 ~ 44242803 (-) |
| G1934871 | NA | non-coding | downstream | 65978 | 44240804 ~ 44241279 (-) |
| G1934858 | NA | non-coding | downstream | 73994 | 44232808 ~ 44233263 (-) |
| G1934847 | NA | non-coding | downstream | 80253 | 44226645 ~ 44227004 (-) |
| G1935310 | NA | non-coding | upstream | 2586 | 44310061 ~ 44310547 (-) |
| G1935271 | NA | non-coding | upstream | 7025 | 44314500 ~ 44341827 (-) |
| G1935343 | NA | non-coding | upstream | 89527 | 44397002 ~ 44397309 (-) |
| G1935356 | NA | non-coding | upstream | 112514 | 44419989 ~ 44420297 (-) |
| G1935357 | NA | non-coding | upstream | 113089 | 44420564 ~ 44420765 (-) |
| G1935283 | NA | other | downstream | 48596 | 44257296 ~ 44258661 (-) |
| G1934102 | NA | other | downstream | 1107442 | 43199373 ~ 43199815 (-) |
| G1934061 | NA | other | downstream | 1153290 | 43119965 ~ 43153967 (-) |
| G1933529 | NA | other | downstream | 1906930 | 42399897 ~ 42400327 (-) |
| G1933401 | NA | other | downstream | 2231318 | 42073127 ~ 42075939 (-) |
| G1935421 | NA | other | upstream | 213680 | 44521155 ~ 44521439 (-) |
| G1935467 | NA | other | upstream | 271547 | 44579022 ~ 44585392 (-) |
| G1935978 | NA | other | upstream | 1088557 | 45396032 ~ 45397761 (-) |
