G1935017


Basic Information

Item Value
gene id G1935017
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 44507558 ~ 44507793 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213663
gtagtgtagggttcattgggatgccttctacctactacagtagattgtagtgtagggttcattggggtgccttctacctactacagtagattgtagtgtagggttcattgggatgccttctacctactacagtagattgtagtacagggttcattgggatgccttctacctactacagtagattgtagtgtagggttcattgggatgccttctacctactacagtagattgtagta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213663 True 236 lncRNA 0.44 1 44507558 44507793

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 1015656 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 1042313 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 1087083 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 1294846 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 1722398 42723531 ~ 42785160 (+)
G1935015 NA non-coding upstream 1211 44506051 ~ 44506347 (+)
G1935012 NA non-coding upstream 6698 44500493 ~ 44500860 (+)
G1935010 NA non-coding upstream 9871 44497451 ~ 44497687 (+)
G1935009 NA non-coding upstream 11583 44495690 ~ 44495975 (+)
G1934990 NA non-coding upstream 42646 44464429 ~ 44464912 (+)
G1935018 NA non-coding downstream 1007 44508800 ~ 44509184 (+)
G1935019 NA non-coding downstream 1971 44509764 ~ 44510140 (+)
G1935022 NA non-coding downstream 17896 44525689 ~ 44526195 (+)
G1935031 NA non-coding downstream 36699 44544492 ~ 44544745 (+)
G1935051 NA non-coding downstream 69685 44577478 ~ 44586078 (+)
G1934201 NA other upstream 1072206 43433448 ~ 43435352 (+)
G1933999 NA other upstream 1348992 43158103 ~ 43158566 (+)
G1933574 NA other upstream 1972575 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 2006568 42495580 ~ 42500990 (+)
G1933255 NA other upstream 2117297 42389427 ~ 42390261 (+)
G1935694 NA other downstream 592509 45100302 ~ 45103958 (+)
G1935696 NA other downstream 596339 45104132 ~ 45104500 (+)
G1935897 NA other downstream 780717 45288510 ~ 45289135 (+)
G1936028 NA other downstream 977550 45485343 ~ 45492999 (+)
G1936029 NA other downstream 977943 45485736 ~ 45487871 (+)

Expression


Co-expression Network