G1935485


Basic Information

Item Value
gene id G1935485
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 44619980 ~ 44622656 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2214236
gagagagagagagggaggagagagagagagatggagagagagagagggattgaaggagagtgggatggaaagagagaggggggatggagagagggggatggagagagaaagtatttttttaatttttacaaATTtgaattcacctttatttaaccaggtaggccagatcacctttatttaaccagataggctagttgagaacaaattctcatttgcaactgtgacctggccaagataaagcatagcagtgtgaacagacaacacagagttacacatggagtaaacaataaacaagtcaataacatagtagaaaaaaagatgatctatatacattgtgtgcaaaaggcatgaggaggtaggcaataaataggccataggagtgaataattacaatttagcagattaacactggagtgataaattatcagatgaacatgcgcaagtagagatactggtgtgcaaaagagcagaaaagtaatttaaataaaaacagtatgggaatgaggtaggtagattgggtgggctatttaccgatagactatgtacagctgcagcgatcggttagctgctcagatagcagatgtttaaagttggtgagggagataaaagtctccaacttcagagatgtttgcaattcgttccagtcgcaggcagcagagaactggaaggaaaggcggccaaatgaggtgttggctttggggatgaccagtgaaatacacctgctggagcgcatgctacaggtgggtgttgttattgtgaccagtgagatacatAGAGAACAGGGTTCGATTTGAGATGCGGAGGTTATCAAATTGGTTTGGAGACTCATGTAAAGTAAGATTAGAGACATTAGAGATTATGAATGTCATTATGTTTTAGAAAATAATGTAACAATGACATGTATCAGCCAGTGAAGGCTCctctgagggatggagggagagagagagggatggatggagagagagagagagagagggatgagagacagagatggatggagaaagaggaaggagagagacagtaaagagagggatagagagacagggatgagagacagagggatggagaaagagggaggagagagacagtaaagagagggatagagagagggggatgagagacagagagggatggatggagagagagagagagagagggatgagagacagagagggatggagaaagagggaggagagagacagtaaagagaggaatagagagacagggatggagagagagggatgcgagagagagagggatggagagatagaatgatggaaacaggaaagagagggatagagagagagatagagagaggaatggatagagagagagatgaagggatggagacaggaaagagagggatagagagggaggcatgagagagagggatagagagggaggcatgagagagagggatagagagagcgatggagggagagggatagagagagcgatagagagagcgatggagggagagggatagagagagagaggctacagaAGACTGTTGCTGTGGCTTTACGGTGCATTGATAGAGTGGGTTGGTAATGAACAGTGAAAGCTAGAGTtcaggggtagtggtggtggtgtgggcctctgggcagagagagggaaatataTGTCCTGTATGGCagcctatttcctatgtagtcgCCATAccactctggtcaaaggtagtgcactaaatagggaatagggtgcgattgttttttttttatttaatccattttaaaataattctgtaacgtaacaaaatgtggaaaaagtcaatgggtctgaattaTTTCGGAAGGTAATGTAGATAAATGTGTACAGGACTTTTGTTTTCCTGtgaggacatttaaaaaaaaaatatatatatatatacagtataaacaaataaatattAGAGTACTCGAACAGTCAAAAAAGATCCCATGCCCATCTAAAAAGGCCATCTAGCCAACCCCTCACAGATACAGTGCTGGTCGGCTAGTCTACATGTTGACATTAAGGATAAGAGAGAggtttgtatttgtcaaacggcagtcgaGCATCGATcctcatgtcaccagaataagactctggttatttattggaaaggagcatcaagctcatcaccgtgcactttcaccaccctgttcaccatAACACATTTCATctgtttcctgagtcgtagtgggaagaCCACACAGCATGACTCCAAGTTGACTTAAATATGATTGTTGTTATTTAGGGGCTATTTAGGGTTCAGGGGCTTTAACATTAAGGCATTTCCACCGCAATTTGTCACAAATAatatacagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2214236 True 2289 lncRNA 0.43 4 44619980 44622656

Neighbor

gene id symbol gene type direction distance location
LOC118943991 NA coding downstream 24336 44593457 ~ 44595644 (-)
LOC118944048 NA coding downstream 965273 43652793 ~ 43654707 (-)
LOC118944047 NA coding downstream 969671 43649406 ~ 43650309 (-)
LOC118944046 NA coding downstream 1115330 43502301 ~ 43504650 (-)
LOC110503290 LOC106613395 coding downstream 1180701 43434126 ~ 43439279 (-)
LOC110503298 yap1 coding upstream 678658 45301314 ~ 45370352 (-)
LOC118944063 NA coding upstream 711465 45334121 ~ 45336972 (-)
LOC110503441 cntn5 coding upstream 948422 45571078 ~ 45883165 (-)
G1935481 NA non-coding downstream 5643 44612300 ~ 44614337 (-)
G1935467 NA non-coding downstream 34588 44579022 ~ 44585392 (-)
G1935442 NA non-coding downstream 75588 44543838 ~ 44544392 (-)
G1935441 NA non-coding downstream 78182 44541177 ~ 44541798 (-)
G1935439 NA non-coding downstream 80741 44539014 ~ 44539239 (-)
G1935501 NA non-coding upstream 31117 44653773 ~ 44657145 (-)
G1935503 NA non-coding upstream 39801 44662457 ~ 44663202 (-)
G1935518 NA non-coding upstream 64825 44687481 ~ 44696157 (-)
G1935521 NA non-coding upstream 81378 44704034 ~ 44704514 (-)
G1935522 NA non-coding upstream 89097 44711753 ~ 44712400 (-)
G1935421 NA other downstream 98541 44521155 ~ 44521439 (-)
G1935283 NA other downstream 361319 44257296 ~ 44258661 (-)
G1934102 NA other downstream 1420165 43199373 ~ 43199815 (-)
G1934061 NA other downstream 1466013 43119965 ~ 43153967 (-)
G1935978 NA other upstream 773376 45396032 ~ 45397761 (-)

Expression


Co-expression Network