G1935062


Basic Information

Item Value
gene id G1935062
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 44620958 ~ 44621391 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213728
cctgtctccatcccttcatctctctctctatccctctctctcatgcctccctctctatccctctctctcatgcctccctctctatccctctctttcctgtctccatccctccatctatcgcCATTTctctccccattcctctctctatctctctctctatccctctctttcctgtttccatcattctatctctccatccctctctctctcgcatccctctctctccatccctgtctctctattcctctctttactgtctctctcctccctctttctccatccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213728 True 284 lncRNA 0.51 2 44620958 44621391

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 1129056 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 1155713 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 1200483 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 1408246 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 1835798 42723531 ~ 42785160 (+)
G1935033 nectin1 non-coding upstream 17667 44598119 ~ 44603291 (+)
G1935034 NA non-coding upstream 23881 44593457 ~ 44597077 (+)
G1935052 NA non-coding upstream 34232 44586431 ~ 44586726 (+)
G1935051 NA non-coding upstream 34880 44577478 ~ 44586078 (+)
G1935031 NA non-coding upstream 76213 44544492 ~ 44544745 (+)
G1935072 NA non-coding downstream 15205 44636596 ~ 44637635 (+)
G1935074 NA non-coding downstream 18507 44639898 ~ 44640849 (+)
G1935081 NA non-coding downstream 34442 44655833 ~ 44656425 (+)
G1935099 NA non-coding downstream 66044 44687435 ~ 44696088 (+)
G1935101 NA non-coding downstream 70056 44691447 ~ 44694584 (+)
G1934201 NA other upstream 1185606 43433448 ~ 43435352 (+)
G1933999 NA other upstream 1462392 43158103 ~ 43158566 (+)
G1933574 NA other upstream 2085975 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 2119968 42495580 ~ 42500990 (+)
G1933255 NA other upstream 2230697 42389427 ~ 42390261 (+)
G1935694 NA other downstream 478911 45100302 ~ 45103958 (+)
G1935696 NA other downstream 482741 45104132 ~ 45104500 (+)
G1935897 NA other downstream 667119 45288510 ~ 45289135 (+)
G1936028 NA other downstream 863952 45485343 ~ 45492999 (+)
G1936029 NA other downstream 864345 45485736 ~ 45487871 (+)

Expression


Co-expression Network