G1935072


Basic Information

Item Value
gene id G1935072
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 44636596 ~ 44637635 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213740
tcttctcctctttctcttctcctctctctcctctctctcttcacctctttctcttctcctctctctcttctcctctttctcttctcctctctctcttctcctctctctcctctttctcttctcctctctctctctcctctctcccttctcctctgtctcttctcctctctctcttctcctctctctcctctctctcttctcctctttctcttctcctctctctcttctccactctctcttctcctctctctcttctcctctctctcttctcctctttctcttctcctctctctcttctccactctctcttctcctctctctcttctcctctctctcttctcctctttctcttctcctctctctcttctcctctctctcttctcctctttctcttctcctctctctcctctcctctttctcttctcctctctctcttctcctctctctcttctcctctctctcttctcctctctcttttctactctttctcttctcctctctctcttctcctctgtctcttctcctctgtctcttttcctctctctcttctcctctctctatcctctttctctcttcttctctctataaTTTTTCcttttcctgtcctctctctttcttctcttgcTAGCTGTCAACACGTTTCCTTCCTTCTGTCACCAACTTCATGACTTTGCGGTGGCTTCcgttgtgtgtgaatgtgtggggtaAATGTCACTCACACCATTAAACCTTTGGACCCGATTGAATTCACCGTAAAAAGCAGAAGAGATTCAGAAGCCTGCTCTGAGGGAGATAACAACACGC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213740 True 804 lncRNA 0.47 3 44636596 44637635

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 1144694 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 1171351 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 1216121 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 1423884 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 1851436 42723531 ~ 42785160 (+)
G1935062 NA non-coding upstream 15205 44620958 ~ 44621391 (+)
G1935033 nectin1 non-coding upstream 33305 44598119 ~ 44603291 (+)
G1935034 NA non-coding upstream 39519 44593457 ~ 44597077 (+)
G1935052 NA non-coding upstream 49870 44586431 ~ 44586726 (+)
G1935051 NA non-coding upstream 50518 44577478 ~ 44586078 (+)
G1935074 NA non-coding downstream 2263 44639898 ~ 44640849 (+)
G1935081 NA non-coding downstream 18198 44655833 ~ 44656425 (+)
G1935099 NA non-coding downstream 49800 44687435 ~ 44696088 (+)
G1935101 NA non-coding downstream 53812 44691447 ~ 44694584 (+)
G1935158 NA non-coding downstream 178527 44816162 ~ 44816500 (+)
G1934201 NA other upstream 1201244 43433448 ~ 43435352 (+)
G1933999 NA other upstream 1478030 43158103 ~ 43158566 (+)
G1933574 NA other upstream 2101613 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 2135606 42495580 ~ 42500990 (+)
G1933255 NA other upstream 2246335 42389427 ~ 42390261 (+)
G1935694 NA other downstream 462667 45100302 ~ 45103958 (+)
G1935696 NA other downstream 466497 45104132 ~ 45104500 (+)
G1935897 NA other downstream 650875 45288510 ~ 45289135 (+)
G1936028 NA other downstream 847708 45485343 ~ 45492999 (+)
G1936029 NA other downstream 848101 45485736 ~ 45487871 (+)

Expression


Co-expression Network