G1935081


Basic Information

Item Value
gene id G1935081
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 44655833 ~ 44656425 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213752
tgtatatttaaagggttgtcagtggactgactgtaaacgctctgagagactctgggttgaggtcagtgataaagtagtgcacagtactactgccaagagatgagctataggtgtacctaccataggagccCCCTCgaagccactctctctctcctccctctgttctctctctccactcttactctgttctcccctctctctctctgttttccctaatctttctctgttctctctctgttctctccccactctctctctgtctctctctatctcctctctctctgttctcccctcacactctctctctgtctctctctatctcctctctctctctatctcatctctctctgttctcccctcactctctctctgtctctctctctgttctctcttctctcacactgttctcccctctctctctctgtctttctctatctcctctctcctccctctctctgttctcccctctctctctctgtctctctctatctcctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213752 True 495 lncRNA 0.49 2 44655833 44656425

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 1163931 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 1190588 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 1235358 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 1443121 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 1870673 42723531 ~ 42785160 (+)
G1935074 NA non-coding upstream 14984 44639898 ~ 44640849 (+)
G1935072 NA non-coding upstream 18198 44636596 ~ 44637635 (+)
G1935062 NA non-coding upstream 34442 44620958 ~ 44621391 (+)
G1935033 nectin1 non-coding upstream 52542 44598119 ~ 44603291 (+)
G1935034 NA non-coding upstream 58756 44593457 ~ 44597077 (+)
G1935099 NA non-coding downstream 31010 44687435 ~ 44696088 (+)
G1935101 NA non-coding downstream 35022 44691447 ~ 44694584 (+)
G1935158 NA non-coding downstream 159737 44816162 ~ 44816500 (+)
G1935219 NA non-coding downstream 289904 44946329 ~ 44947185 (+)
G1935220 NA non-coding downstream 292025 44948450 ~ 44949088 (+)
G1934201 NA other upstream 1220481 43433448 ~ 43435352 (+)
G1933999 NA other upstream 1497267 43158103 ~ 43158566 (+)
G1933574 NA other upstream 2120850 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 2154843 42495580 ~ 42500990 (+)
G1933255 NA other upstream 2265572 42389427 ~ 42390261 (+)
G1935694 NA other downstream 443877 45100302 ~ 45103958 (+)
G1935696 NA other downstream 447707 45104132 ~ 45104500 (+)
G1935897 NA other downstream 632085 45288510 ~ 45289135 (+)
G1936028 NA other downstream 828918 45485343 ~ 45492999 (+)
G1936029 NA other downstream 829311 45485736 ~ 45487871 (+)

Expression


Co-expression Network