G1935503


Basic Information

Item Value
gene id G1935503
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 44662457 ~ 44663202 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2214268
GCATGTTGACTCATGTAGTGTTTTAATCCTGTCTGCTTGGTGTGATCTAACAGCTGTAACCTTGACAGCATCCGTTCTTTCTCTTCTGCTGTGCCTTTATCTCACTCTAGTATGACTCAGGACAGAGGTGAAATAGAGGAATCAGTGATGTCTTCTGTCAGGGGATCATTAGACCATCGATAGTGGtttctgagagagagacacagagagagagagagagagacacacagagatagagagagagagagaaagaaagagagacagagagagagagacacagagagagagagagagacagagacgcagagagagacagagagagagagacacagagagagagagtgagaaagaattagagagagagagagagagagacacagatagaatagagacacagagagagagagagagaaagagagagagagacagagagagagagagaaagaaagagggacagagagagagagaaagagagagagagtgagaaagaattAGAATtactgttgccacgagaaaagggcaaccagtgaagaacacacaccattgtaaatacaacccatatttatgcgtatttatttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2214268 True 580 lncRNA 0.43 2 44662457 44663202
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118943991 NA coding downstream 66813 44593457 ~ 44595644 (-)
LOC118944048 NA coding downstream 1007750 43652793 ~ 43654707 (-)
LOC118944047 NA coding downstream 1012148 43649406 ~ 43650309 (-)
LOC118944046 NA coding downstream 1157807 43502301 ~ 43504650 (-)
LOC110503290 LOC106613395 coding downstream 1223178 43434126 ~ 43439279 (-)
LOC110503298 yap1 coding upstream 638112 45301314 ~ 45370352 (-)
LOC118944063 NA coding upstream 670919 45334121 ~ 45336972 (-)
LOC110503441 cntn5 coding upstream 907876 45571078 ~ 45883165 (-)
G1935501 NA non-coding downstream 5312 44653773 ~ 44657145 (-)
G1935485 NA non-coding downstream 39801 44619980 ~ 44622656 (-)
G1935481 NA non-coding downstream 48120 44612300 ~ 44614337 (-)
G1935467 NA non-coding downstream 77065 44579022 ~ 44585392 (-)
G1935442 NA non-coding downstream 118065 44543838 ~ 44544392 (-)
G1935518 NA non-coding upstream 24279 44687481 ~ 44696157 (-)
G1935521 NA non-coding upstream 40832 44704034 ~ 44704514 (-)
G1935522 NA non-coding upstream 48551 44711753 ~ 44712400 (-)
G1935523 NA non-coding upstream 49263 44712465 ~ 44712703 (-)
G1935560 NA non-coding upstream 121538 44784740 ~ 44785814 (-)
G1935421 NA other downstream 141018 44521155 ~ 44521439 (-)
G1935283 NA other downstream 403796 44257296 ~ 44258661 (-)
G1934102 NA other downstream 1462642 43199373 ~ 43199815 (-)
G1934061 NA other downstream 1508490 43119965 ~ 43153967 (-)
G1935978 NA other upstream 732830 45396032 ~ 45397761 (-)

Expression

G1935503 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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G1935503 Expression in each Bioproject

Bar chart with 16 bars.
G1935503 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
End of interactive chart.

Co-expression Network