G1935099


Basic Information

Item Value
gene id G1935099
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 44687435 ~ 44696088 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213778
ttaccaaacacggtgaggtttatgttgtgtcaactagtccttaccaaacacggtgaggtttatattgtgttatatagtccttaccaaacacggtgaggtttatattgtgtcaactagtccttaccaaacacggtgaggtttatattgtgtcaactagtccttaccaaacacggtgaggtttatattgtgttatctagtccttaccaaacacggtgaggtttatattgtgttaactagtccttaccaaacacggtgaggtttatattgtgttatctagttcttaccaaacacggtgaggtttatgttgtgttatctagtccttaccaaacacggtgaggtttatattgtgttatctagttcttaccaaacacggtgaggtttatattgtgttatctagtccttaccaaacacggtgaggtttatat
>TU2213777
gaggtttatgttgtgttaactagtccttaccaaacacggtgaggtttatattgtgttatctagttcttaccaaacacggtgaggtttatattgtgttaactagtccttaccaaacacggtgaggtttatgttgtgttaactagtccttaccaaacacggtgaggtttatgttgtgttaactagtccttaccaaacacggtgaggtttatattgtgttaactagtccttaccaaacacggtgaggtttatattgtgtcaactagtccttaccaaacacggtgaggtttatattgtgttaactagtccttaccaaacacggtgaggtttatattgtgtttactaGTCCttccttaccaaacacggtgaggtttatgttgtgttaactagttcttaccaaacacggtgaggtttatattgtgtcaactagtccttaccaaacacagtgaggtttatgttgtgtcaactagtccttaccaaacacggtgaggtttatattgtgtttactaGTCCtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213778 False 425 lncRNA 0.38 3 44687435 44693479
TU2213777 True 512 lncRNA 0.38 3 44692241 44696088

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 1195533 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 1222190 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 1266960 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 1474723 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 1902275 42723531 ~ 42785160 (+)
G1935081 NA non-coding upstream 31010 44655833 ~ 44656425 (+)
G1935074 NA non-coding upstream 46586 44639898 ~ 44640849 (+)
G1935072 NA non-coding upstream 49800 44636596 ~ 44637635 (+)
G1935062 NA non-coding upstream 66044 44620958 ~ 44621391 (+)
G1935033 nectin1 non-coding upstream 84144 44598119 ~ 44603291 (+)
G1935158 NA non-coding downstream 120074 44816162 ~ 44816500 (+)
G1935219 NA non-coding downstream 250241 44946329 ~ 44947185 (+)
G1935220 NA non-coding downstream 252362 44948450 ~ 44949088 (+)
G1935231 NA non-coding downstream 283961 44980049 ~ 44980270 (+)
G1935233 NA non-coding downstream 290958 44987046 ~ 44987248 (+)
G1934201 NA other upstream 1252083 43433448 ~ 43435352 (+)
G1933999 NA other upstream 1528869 43158103 ~ 43158566 (+)
G1933574 NA other upstream 2152452 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 2186445 42495580 ~ 42500990 (+)
G1933255 NA other upstream 2297174 42389427 ~ 42390261 (+)
G1935694 NA other downstream 404214 45100302 ~ 45103958 (+)
G1935696 NA other downstream 408044 45104132 ~ 45104500 (+)
G1935897 NA other downstream 592422 45288510 ~ 45289135 (+)
G1936028 NA other downstream 789255 45485343 ~ 45492999 (+)
G1936029 NA other downstream 789648 45485736 ~ 45487871 (+)

Expression


Co-expression Network