G1935532


Basic Information

Item Value
gene id G1935532
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 44801405 ~ 44814304 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2214313
ttcagaccctttcctcagtactttgttgaagcacctttgttgagtcttcttgggtatgatgctgcaagcttggaacacctgtatttggggagtttctcccattcttttctgcagatcctctcaagctctgtctggttggatggggagcgtcactgcacagatattttcaggtctctccagagatgttcaatcaggttcaagtccgggtgctggctgggccactcaaggacattcagagacttgtcctgaagcctctcctgcgttgccttggctgtgtgcttagggtcgttgtcctgatggaaggtgaaccttcgccccagtctgaggtcctgagagctctggagcaggttttcatcaaggatctctctgtaatttgctccgtacatctttccctcgatcctgactagtctcccagtccctgctgctgaaaaacatccccacagtatgatgctgccaccaccatgcttcaccgtagagatggtgccaggtttcctccagatgtgacgcttggcattcaggccaacgagTGAAATCTTGGTTTGATCAGACgggagagtcctttaggtgccttacgacaaacttcaagcgggctgtcatgtgc

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2214313 True 601 lncRNA 0.51 2 44801405 44814304

Neighbor

gene id symbol gene type direction distance location
LOC118943991 NA coding downstream 205761 44593457 ~ 44595644 (-)
LOC118944048 NA coding downstream 1146698 43652793 ~ 43654707 (-)
LOC118944047 NA coding downstream 1151096 43649406 ~ 43650309 (-)
LOC118944046 NA coding downstream 1296755 43502301 ~ 43504650 (-)
LOC110503290 LOC106613395 coding downstream 1362126 43434126 ~ 43439279 (-)
LOC110503298 yap1 coding upstream 487010 45301314 ~ 45370352 (-)
LOC118944063 NA coding upstream 519817 45334121 ~ 45336972 (-)
LOC110503441 cntn5 coding upstream 756774 45571078 ~ 45883165 (-)
G1935560 NA non-coding downstream 15591 44784740 ~ 44785814 (-)
G1935523 NA non-coding downstream 88702 44712465 ~ 44712703 (-)
G1935522 NA non-coding downstream 89005 44711753 ~ 44712400 (-)
G1935521 NA non-coding downstream 96891 44704034 ~ 44704514 (-)
G1935518 NA non-coding downstream 105248 44687481 ~ 44696157 (-)
G1935587 NA non-coding upstream 44935 44859239 ~ 44860281 (-)
G1935619 NA non-coding upstream 133989 44948293 ~ 44948535 (-)
G1935620 NA non-coding upstream 134473 44948777 ~ 44949155 (-)
G1935625 NA non-coding upstream 144169 44958473 ~ 44958830 (-)
G1935632 NA non-coding upstream 151573 44965877 ~ 44966241 (-)
G1935467 NA other downstream 216013 44579022 ~ 44585392 (-)
G1935421 NA other downstream 279966 44521155 ~ 44521439 (-)
G1935283 NA other downstream 542744 44257296 ~ 44258661 (-)
G1934102 NA other downstream 1601590 43199373 ~ 43199815 (-)
G1934061 NA other downstream 1647438 43119965 ~ 43153967 (-)
G1935978 NA other upstream 581728 45396032 ~ 45397761 (-)

Expression


Co-expression Network