G1935158


Basic Information

Item Value
gene id G1935158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 44816162 ~ 44816500 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213845
CTGAATTACTTATAAACAGGAAGTAATAGTAGTGCCTgtatcccaaacagcaccctttTTCTTACATAgtaccctacttttgaccagagccctaaccagagccctatgagggCAGTGGGTTTTGGTCAAAGTAGCTAAATAAATAGGGaggcatttgggacacagttctCAGTTCCCTGTTCAATGTTCTCAGTTCCCTGTTCAATGTTCTCACTTCCCTGTTCAATGTTCTCAATTCCCTGTTCAATGTTCTCAGTTCCCTGTTCAATGTTCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213845 True 276 lncRNA 0.42 2 44816162 44816500

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 1324260 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 1350917 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 1395687 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 1603450 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 2031002 42723531 ~ 42785160 (+)
G1935099 NA non-coding upstream 120074 44687435 ~ 44696088 (+)
G1935101 NA non-coding upstream 121578 44691447 ~ 44694584 (+)
G1935081 NA non-coding upstream 159737 44655833 ~ 44656425 (+)
G1935074 NA non-coding upstream 175313 44639898 ~ 44640849 (+)
G1935072 NA non-coding upstream 178527 44636596 ~ 44637635 (+)
G1935219 NA non-coding downstream 129829 44946329 ~ 44947185 (+)
G1935220 NA non-coding downstream 131950 44948450 ~ 44949088 (+)
G1935231 NA non-coding downstream 163549 44980049 ~ 44980270 (+)
G1935233 NA non-coding downstream 170546 44987046 ~ 44987248 (+)
G1935238 NA non-coding downstream 177778 44994278 ~ 45041868 (+)
G1934201 NA other upstream 1380810 43433448 ~ 43435352 (+)
G1933999 NA other upstream 1657596 43158103 ~ 43158566 (+)
G1933574 NA other upstream 2281179 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 2315172 42495580 ~ 42500990 (+)
G1933255 NA other upstream 2425901 42389427 ~ 42390261 (+)
G1935694 NA other downstream 283802 45100302 ~ 45103958 (+)
G1935696 NA other downstream 287632 45104132 ~ 45104500 (+)
G1935897 NA other downstream 472010 45288510 ~ 45289135 (+)
G1936028 NA other downstream 668843 45485343 ~ 45492999 (+)
G1936029 NA other downstream 669236 45485736 ~ 45487871 (+)

Expression


Co-expression Network