G1935643


Basic Information

Item Value
gene id G1935643
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 45017595 ~ 45032201 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2214470
aaactaaactattactgaccaggagctctataagacactaaactattactgaccaggagctctataagacactaaactattactgaccaggagctatataagaaactaaactattactgaccaggacctctataagaaactaaactattaccgaccaggagctctataagaaactaaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctataggcaactaaactattactgtccaggagctctatcagaaactaaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctatcagaaactaaactattactgaccaggagctctataagaaactaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctataagaaactaaactattactaaccaggagctctataagaaactaaactattaccgaccaggacctctataagaaactaaactattactgaccaggagctctataagaaactaaactattactgtccaggagctctatcagaaactaaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctataagacactaaactattacttaccaggagctctataagacactaaactattactgaccaggagctataTAAGAAaataaactattactgaccaggacctctataagaaactaaacttttactgaccaggagctctataagaaactaaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctataggaaactaaactattactgtccaggagctctatcagaaactaaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctatcagaaactaaactattactgaccaggagctctataagaaactaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctatctgaaactaaactgttactgaccaggagctctataagaaactaaactactactgaccaggagctctataagacactaaactattactgaccgggagctctataagaaactaaactattactgaccaggagctctataagacactaaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctataagacactaaactattactgaccaggagctctatcagaaactaaactattactgaccaggagctctataagaaactaa
>TU2214471
aaactaaactattactgaccaggagctctataagacactaaactattactgaccaggagctctataagacactaaactattactgaccaggagctatataagaaactaaactattactgaccaggacctctataagaaactaaactattaccgaccaggagctctataagaaactaaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctataggcaactaaactattactgtccaggagctctatcagaaactaaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctatcagaaactaaactattactgaccaggagctctataagaaactaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctataagaaactaaactattactaaactattactgaccaggagctctaaaagaaactaaactattactgaccaggagctctataagaaactaaactattaccgaccaggagctctataagaaactaaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctataagaaactaaactattactatccaggagctctatcagaaactaaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctataagaaactaaactactaCTGAcaaggagctctataagacactaaactattactgaccgggagctctataagaaactaaactattactgaccaggagctctataagacactaaactattactgaccaggagctctataagaaactaaactattactgaccaggagctctataagacactaaactattactgaccaggagctctatcagaaactaaactattactgaccaggagctctataagaaactaactattactgaccaggagctctataaggaactaaactattactgaccaggagctctataagaagctaaaatattactgaccaggagctctataagaaactaaactattactgaccaggagctctataagaaactaaactattactgaccaggagctccataagaaactaaactattactgaccaggagctctataagaaactaaactattactaaccaggagctctataagaaactaaactattac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2214470 False 1365 lncRNA 0.36 2 45017595 45032201
TU2214471 True 1248 lncRNA 0.36 2 45022466 45032201

Neighbor

gene id symbol gene type direction distance location
LOC118943990 nectin1 coding downstream 119163 44326788 ~ 44898432 (-)
LOC118943991 NA coding downstream 421951 44593457 ~ 44595644 (-)
LOC118944048 NA coding downstream 1362888 43652793 ~ 43654707 (-)
LOC118944047 NA coding downstream 1367286 43649406 ~ 43650309 (-)
LOC118944046 NA coding downstream 1512945 43502301 ~ 43504650 (-)
LOC110503298 yap1 coding upstream 269113 45301314 ~ 45370352 (-)
LOC118944063 NA coding upstream 301920 45334121 ~ 45336972 (-)
LOC110503441 cntn5 coding upstream 538877 45571078 ~ 45883165 (-)
G1935651 NA non-coding downstream 714 45005468 ~ 45016881 (-)
G1935646 NA non-coding downstream 9948 44990612 ~ 45007647 (-)
G1935638 NA non-coding downstream 31038 44986348 ~ 44986557 (-)
G1935632 NA non-coding downstream 51354 44965877 ~ 44966241 (-)
G1935625 NA non-coding downstream 58765 44958473 ~ 44958830 (-)
G1935662 NA non-coding upstream 12642 45044843 ~ 45053328 (-)
G1935671 NA non-coding upstream 34253 45066454 ~ 45066753 (-)
G1935672 NA non-coding upstream 34628 45066829 ~ 45067144 (-)
G1935674 NA non-coding upstream 41407 45073608 ~ 45073922 (-)
G1935758 NA non-coding upstream 92833 45125034 ~ 45125514 (-)
G1935467 NA other downstream 432203 44579022 ~ 44585392 (-)
G1935421 NA other downstream 496156 44521155 ~ 44521439 (-)
G1935283 NA other downstream 758934 44257296 ~ 44258661 (-)
G1934102 NA other downstream 1817780 43199373 ~ 43199815 (-)
G1934061 NA other downstream 1863628 43119965 ~ 43153967 (-)
G1935978 NA other upstream 363831 45396032 ~ 45397761 (-)

Expression


Co-expression Network