G1935662


Basic Information

Item Value
gene id G1935662
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 45044843 ~ 45053328 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2214496
ggatatgtgactgtaggtggaggtagagaggtatgtgactgtaggtggaggtatgtgactgtaggtggaggtatagaggtatgggactgtaggtggaggtatagaggtatgggactgtaggtggaggtaaagaggtatgggactgtaggtggaggtatagaggtatgggactgtaggtggaggtatagaggtatgggactgtaggtggaggtatagaggtatgggactgtaggtggaggtaaagaggtatgggactgtaggtggaggtaaagaggtatgggactgtaggtgggggTATAGAGGTATgagactgtaggtggaggtaaagaggtatgtgactgtaggtggggGTATAGAGGTATgagactgtaggtggaggtaaagaggtatgtgactgtaggtgggggTATAGAGGTATgagactgtaggtggaggtaaagag
>TU2214497
tgtaggtggaggtagagaggtatgggactgtaggtggaggtatagaggtatgggactgtaggtggaggtatagaggcatgggactgtaggtggaggtatagatgcatgggactgtaggtggaggtatagaggtatgggactgtaggtggaggtatagaggtatgggactgtaggtggaggtatagaggtatgggactgtaggtggaggtatgggactgtaggtggaggtaaagaggtatgggactgtaggtggaggtatagaggtatgggactgtaggtggaggtaaagaggtatgggactgtaggtggaggtatgggactgtaggtgggggTATAGAGGTATgagactgtaggtggaggtaaagag
>TU2214498
tgttactgtaggtggaggtatagaggtatgggactgtaggtggaggtaaagaggtatgggactgtaggtggaggtaaagaggtatgggactgtaggtggaggtaaagaggtatgggactgtaggtggaggtatagaggtatgggactgtaggtggaggtaaagaggtatgggactgtaggtggaggtatgggactgtaggtgggggTATAGAGGTATgagactgtaggtggaggtaaagag

Function

NR:

description
PREDICTED: ATP-binding cassette sub-family G member 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2214496 False 442 lncRNA 0.49 3 45044843 45052303
TU2214497 False 367 lncRNA 0.51 4 45044843 45053328
TU2214498 True 241 lncRNA 0.50 2 45044843 45045175

Neighbor

gene id symbol gene type direction distance location
LOC118943990 nectin1 coding downstream 146411 44326788 ~ 44898432 (-)
LOC118943991 NA coding downstream 449199 44593457 ~ 44595644 (-)
LOC118944048 NA coding downstream 1390136 43652793 ~ 43654707 (-)
LOC118944047 NA coding downstream 1394534 43649406 ~ 43650309 (-)
LOC118944046 NA coding downstream 1540193 43502301 ~ 43504650 (-)
LOC110503298 yap1 coding upstream 247986 45301314 ~ 45370352 (-)
LOC118944063 NA coding upstream 280793 45334121 ~ 45336972 (-)
LOC110503441 cntn5 coding upstream 517750 45571078 ~ 45883165 (-)
G1935639 NA non-coding downstream 2491 44993478 ~ 45042352 (-)
G1935648 NA non-coding downstream 7520 44999877 ~ 45037323 (-)
G1935640 NA non-coding downstream 11713 44996958 ~ 45033130 (-)
G1935643 NA non-coding downstream 12642 45017595 ~ 45032201 (-)
G1935651 NA non-coding downstream 27962 45005468 ~ 45016881 (-)
G1935671 NA non-coding upstream 13126 45066454 ~ 45066753 (-)
G1935672 NA non-coding upstream 13501 45066829 ~ 45067144 (-)
G1935674 NA non-coding upstream 20280 45073608 ~ 45073922 (-)
G1935758 NA non-coding upstream 71706 45125034 ~ 45125514 (-)
G1935799 NA non-coding upstream 149706 45203034 ~ 45203382 (-)
G1935467 NA other downstream 459451 44579022 ~ 44585392 (-)
G1935421 NA other downstream 523404 44521155 ~ 44521439 (-)
G1935283 NA other downstream 786182 44257296 ~ 44258661 (-)
G1934102 NA other downstream 1845028 43199373 ~ 43199815 (-)
G1934061 NA other downstream 1890876 43119965 ~ 43153967 (-)
G1935978 NA other upstream 342704 45396032 ~ 45397761 (-)

Expression


Co-expression Network