G1935671



Basic Information


Item Value
gene id G1935671
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 45066454 ~ 45066753 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2214518
cattagttcctgacaaggcagcagcttctcttcctggggtttattatggatccccattagttcctgccaaggcagcagcttctcttcctggggtttattatggatccccattagttcctgccaaggcagcagcttctcttcctggggtttattatggattcccattagttcctgccaaggcagcagctagtcttcctggggtttattatggatccccattagttcctgccaaggcagcagcatctcttcctggggtttattatggatccccattagttcctgccaaggcagcagcatctc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2214518 True 300 lncRNA 0.50 1 45066454 45066753

Neighbor


gene id symbol gene type direction distance location
LOC118943990 nectin1 coding downstream 168022 44326788 ~ 44898432 (-)
LOC118943991 NA coding downstream 470810 44593457 ~ 44595644 (-)
LOC118944048 NA coding downstream 1411747 43652793 ~ 43654707 (-)
LOC118944047 NA coding downstream 1416145 43649406 ~ 43650309 (-)
LOC118944046 NA coding downstream 1561804 43502301 ~ 43504650 (-)
LOC110503298 yap1 coding upstream 234561 45301314 ~ 45370352 (-)
LOC118944063 NA coding upstream 267368 45334121 ~ 45336972 (-)
LOC110503441 cntn5 coding upstream 504325 45571078 ~ 45883165 (-)
G1935662 NA non-coding downstream 13126 45044843 ~ 45053328 (-)
G1935639 NA non-coding downstream 24102 44993478 ~ 45042352 (-)
G1935648 NA non-coding downstream 29131 44999877 ~ 45037323 (-)
G1935640 NA non-coding downstream 33324 44996958 ~ 45033130 (-)
G1935643 NA non-coding downstream 34253 45017595 ~ 45032201 (-)
G1935672 NA non-coding upstream 76 45066829 ~ 45067144 (-)
G1935674 NA non-coding upstream 6855 45073608 ~ 45073922 (-)
G1935758 NA non-coding upstream 58281 45125034 ~ 45125514 (-)
G1935799 NA non-coding upstream 136281 45203034 ~ 45203382 (-)
G1935800 NA non-coding upstream 138367 45205120 ~ 45205379 (-)
G1935467 NA other downstream 481062 44579022 ~ 44585392 (-)
G1935421 NA other downstream 545015 44521155 ~ 44521439 (-)
G1935283 NA other downstream 807793 44257296 ~ 44258661 (-)
G1934102 NA other downstream 1866639 43199373 ~ 43199815 (-)
G1934061 NA other downstream 1912487 43119965 ~ 43153967 (-)
G1935978 NA other upstream 329279 45396032 ~ 45397761 (-)

Expression



Co-expression Network