G1936336



Basic Information


Item Value
gene id G1936336
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 45606643 ~ 45607077 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2215319
gtccttttgtggtgggtgattctgtcacggttttctaggtgtgaaggagagtcggaccaaaatgcggcgtgtctattgcaatccatgtttaatgaagaaacacactaaacacaaacactaccaaaacaataaacttaaacgaaaaccgaaacagcctatacttgtgtatcctaacacagaaacaatgacatcaggacactaaggacaatcacccacgacaaactcaaagaatatggctgcctaaatatggttcccaatcagagacaacgataaacacctgcctctgattgagaaccacttcagacagccatagacttagctagaacaccccactagctacaatccccatacataccacctacaaaaacccatgccacaccctggcctgaccaaataaataaagataaacacaaaatacttcgaccagggcgtgac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2215319 True 435 lncRNA 0.43 1 45606643 45607077

Neighbor


gene id symbol gene type direction distance location
LOC110503298 yap1 coding downstream 236291 45301314 ~ 45370352 (-)
LOC118944063 NA coding downstream 269671 45334121 ~ 45336972 (-)
LOC118943990 nectin1 coding downstream 708211 44326788 ~ 44898432 (-)
LOC118943991 NA coding downstream 1010999 44593457 ~ 44595644 (-)
LOC118944048 NA coding downstream 1951936 43652793 ~ 43654707 (-)
G1936332 NA non-coding downstream 14231 45592152 ~ 45592412 (-)
G1936331 NA non-coding downstream 15457 45590980 ~ 45591186 (-)
G1936311 NA non-coding downstream 44517 45561886 ~ 45562126 (-)
G1936105 NA non-coding downstream 77050 45529308 ~ 45529593 (-)
G1936087 NA non-coding downstream 92100 45513941 ~ 45514543 (-)
G1936337 NA non-coding upstream 1924 45609001 ~ 45609232 (-)
G1936342 NA non-coding upstream 13266 45620343 ~ 45628512 (-)
G1936357 NA non-coding upstream 42909 45649986 ~ 45650265 (-)
G1936370 NA non-coding upstream 56716 45663793 ~ 45712556 (-)
G1936382 NA non-coding upstream 84379 45691456 ~ 45691958 (-)
G1935978 NA other downstream 208882 45396032 ~ 45397761 (-)
G1935467 NA other downstream 1021251 44579022 ~ 44585392 (-)
G1935421 NA other downstream 1085204 44521155 ~ 44521439 (-)
G1935283 NA other downstream 1347982 44257296 ~ 44258661 (-)
G1934102 NA other downstream 2406828 43199373 ~ 43199815 (-)

Expression



Co-expression Network