G1936226


Basic Information

Item Value
gene id G1936226
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 45712644 ~ 45712982 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2215173
catcaggtggtgtaggtgtcctggagggcaggtagtttgcccccggtgatgcgttgtgcagacctcactaccctctggagagccttacggttgtgggcggagcagttgccgtaccaggtggtgatacagcctgacaggatgctctcgattgtgcatctgtagaagtttgtgagtgcttttggtgacaagccaaatttcttcagcctcctgaggttgaagaggcgctgctgcgccttcttcacaatgctgtctgtgtgggtggaccaattcagtttgtctgtgatgtgtacgccgaggaacttaaaacttactaccctctccactactgttccatcgatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2215173 True 339 lncRNA 0.53 1 45712644 45712982

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 2220742 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 2247399 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 2292169 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 2499932 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 2927484 42723531 ~ 42785160 (+)
G1936222 NA non-coding upstream 6306 45705577 ~ 45706338 (+)
G1936202 NA non-coding upstream 22310 45664338 ~ 45690334 (+)
G1936209 NA non-coding upstream 32710 45679639 ~ 45679934 (+)
G1936167 NA non-coding upstream 105539 45606874 ~ 45607105 (+)
G1936164 NA non-coding upstream 115861 45596576 ~ 45596783 (+)
G1936227 NA non-coding downstream 840 45713822 ~ 45714563 (+)
G1936233 NA non-coding downstream 13713 45726695 ~ 45732151 (+)
G1936248 NA non-coding downstream 55161 45768143 ~ 45768528 (+)
G1936249 NA non-coding downstream 55649 45768631 ~ 45769089 (+)
G1936251 NA non-coding downstream 58525 45771507 ~ 45771807 (+)
G1936028 NA other upstream 223769 45485343 ~ 45492999 (+)
G1936029 NA other upstream 224773 45485736 ~ 45487871 (+)
G1935897 NA other upstream 423509 45288510 ~ 45289135 (+)
G1935696 NA other upstream 608144 45104132 ~ 45104500 (+)
G1935694 NA other upstream 608686 45100302 ~ 45103958 (+)
G1936247 NA other downstream 52868 45765850 ~ 45767859 (+)
G1936286 NA other downstream 131722 45844704 ~ 45846538 (+)

Expression


Co-expression Network