Gene
RNA
| Item | Value |
|---|---|
| gene id | adam17a |
| gene name | LOC106610723 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 10359615 ~ 10383848 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| disintegrin and metalloproteinase domain-containing protein 17-like |
| id | description |
|---|---|
| K06059 | ADAM17, TACE, CD156b; disintegrin and metalloproteinase domain-containing protein 17 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036963085.1 | False | 4053 | mRNA | 0.51 | 20 | 10359615 | 10383848 |
| XM_036963086.1 | False | 4050 | mRNA | 0.51 | 20 | 10359615 | 10383848 |
| XM_036963087.1 | True | 4006 | mRNA | 0.51 | 19 | 10359616 | 10383845 |
10,332,000
10,336,000
10,340,000
10,344,000
10,348,000
10,352,000
10,356,000
10,360,000
10,364,000
10,368,000
10,372,000
10,376,000
10,380,000
10,384,000
NC_048589.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| itgb1bp1 | itgb1bp1 | coding | downstream | 5407 | 10341523 ~ 10354208 (-) |
| mboat2a | LOC106566507 | coding | downstream | 137711 | 10081654 ~ 10221904 (-) |
| LOC110505318 | NA | coding | downstream | 280396 | 10073902 ~ 10079219 (-) |
| kidins220a | LOC106610701 | coding | downstream | 286419 | 9969792 ~ 10073196 (-) |
| cmpk2 | cmpk2 | coding | downstream | 771759 | 9575380 ~ 9587856 (-) |
| LOC100136195 | LOC100136195 | coding | upstream | 2923 | 10386771 ~ 10398050 (-) |
| LOC110505327 | LOC106610719 | coding | upstream | 196026 | 10579874 ~ 10607038 (-) |
| LOC110504315 | NA | coding | upstream | 270838 | 10654686 ~ 10665355 (-) |
| LOC110505329 | LOC106610716 | coding | upstream | 385993 | 10769777 ~ 10799354 (-) |
| LOC110505331 | LOC106610712 | coding | upstream | 442597 | 10826445 ~ 10839143 (-) |
| G1949594 | NA | non-coding | downstream | 27883 | 10330467 ~ 10331732 (-) |
| G1949587 | asap2 | non-coding | downstream | 33599 | 10316666 ~ 10326016 (-) |
| G1949450 | NA | non-coding | downstream | 183548 | 10171179 ~ 10176067 (-) |
| G1949484 | NA | non-coding | downstream | 195855 | 10147806 ~ 10163760 (-) |
| G1949462 | NA | non-coding | downstream | 272809 | 10086360 ~ 10086806 (-) |
| G1949611 | NA | non-coding | upstream | 16935 | 10400783 ~ 10401683 (-) |
| G1949641 | NA | non-coding | upstream | 61170 | 10445018 ~ 10445693 (-) |
| G1949699 | LOC106610718 | non-coding | upstream | 178569 | 10562417 ~ 10565224 (-) |
| G1950171 | NA | non-coding | upstream | 285295 | 10669143 ~ 10676839 (-) |
| G1950221 | NA | non-coding | upstream | 364868 | 10748716 ~ 10748973 (-) |
| G1949387 | NA | other | downstream | 410255 | 9948906 ~ 9949360 (-) |
| G1945534 | NA | other | downstream | 3437251 | 6921985 ~ 6922364 (-) |
| G1945526 | LOC100136012 | other | downstream | 3444388 | 6914595 ~ 6915227 (-) |
| G1945488 | NA | other | downstream | 3494971 | 6863805 ~ 6864644 (-) |
| fancm | fancm | other | downstream | 4580846 | 5765698 ~ 5833986 (-) |
| G1950222 | LOC106610714 | other | upstream | 367271 | 10751119 ~ 10752009 (-) |
| G1950292 | NA | other | upstream | 501015 | 10884863 ~ 10885108 (-) |
| LOC118944219 | vps4a | other | upstream | 1013220 | 11397068 ~ 11481374 (-) |
| LOC110505340 | LOC106588272 | other | upstream | 1023490 | 11394818 ~ 11410200 (-) |
