Item | Value |
---|---|
gene id | esrrga |
gene name | LOC106570958 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048589.1 |
NCBI id | CM023243.3 |
chromosome length | 47542702 |
location | 12134910 ~ 12240158 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: estrogen-related receptor gamma-like isoform X1 |
id | name | namespace |
---|---|---|
GO:0006355 | regulation of transcription, DNA-templated | biological_process |
GO:0043401 | steroid hormone mediated signaling pathway | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0043565 | sequence-specific DNA binding | molecular_function |
GO:0005496 | steroid binding | molecular_function |
GO:0003700 | DNA-binding transcription factor activity | molecular_function |
GO:0003707 | steroid hormone receptor activity | molecular_function |
GO:0008270 | zinc ion binding | molecular_function |
id | description |
---|---|
K08554 | NR3B3, ESRRG; estrogen-related receptor gamma |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036962720.1 | False | 1938 | mRNA | 0.56 | 8 | 12134910 | 12235612 |
XM_036962721.1 | False | 1959 | mRNA | 0.56 | 8 | 12134914 | 12235612 |
XM_036962719.1 | True | 6500 | mRNA | 0.45 | 8 | 12134915 | 12240158 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110505357 | NA | coding | upstream | 175372 | 11956246 ~ 11959538 (+) |
kif28 | kif28p | coding | upstream | 583075 | 11536098 ~ 11551835 (+) |
LOC110505350 | LOC106610733 | coding | upstream | 602210 | 11503450 ~ 11532700 (+) |
LOC110505337 | scpdh | coding | upstream | 839530 | 11267373 ~ 11295380 (+) |
LOC110505332 | LOC106610711 | coding | upstream | 1122158 | 10844977 ~ 11012752 (+) |
LOC110505364 | LOC106610747 | coding | downstream | 399524 | 12639682 ~ 12647343 (+) |
LOC110505366 | LOC106610818 | coding | downstream | 410767 | 12650925 ~ 12662628 (+) |
LOC110504192 | LOC106610748 | coding | downstream | 424865 | 12665023 ~ 12701326 (+) |
LOC110505362 | LOC106610749 | coding | downstream | 461904 | 12702062 ~ 12718303 (+) |
rpap1 | rpap1 | coding | downstream | 516091 | 12756249 ~ 12768426 (+) |
G1951102 | NA | non-coding | upstream | 83882 | 12050694 ~ 12051028 (+) |
G1951099 | NA | non-coding | upstream | 87713 | 12046974 ~ 12047197 (+) |
G1951040 | NA | non-coding | upstream | 206010 | 11928646 ~ 11928900 (+) |
G1951033 | NA | non-coding | upstream | 211711 | 11922905 ~ 11923199 (+) |
G1950922 | NA | non-coding | upstream | 286298 | 11848292 ~ 11848612 (+) |
G1951340 | NA | non-coding | downstream | 25033 | 12265191 ~ 12265456 (+) |
G1951343 | NA | non-coding | downstream | 27573 | 12267731 ~ 12268490 (+) |
G1951345 | NA | non-coding | downstream | 30314 | 12270472 ~ 12270792 (+) |
G1951347 | NA | non-coding | downstream | 32733 | 12272891 ~ 12273274 (+) |
G1951349 | NA | non-coding | downstream | 37985 | 12278143 ~ 12282152 (+) |
G1950642 | LOC106610734 | other | upstream | 577002 | 11554525 ~ 11557908 (+) |
LOC110505330 | LOC106610717 | other | upstream | 1320346 | 10809234 ~ 10814564 (+) |
G1949039 | 1433b | other | upstream | 1746197 | 10386771 ~ 10462100 (+) |
G1949170 | NA | other | upstream | 1762221 | 10371653 ~ 10372689 (+) |
G1949041 | LOC106610723 | other | upstream | 1773754 | 10357613 ~ 10361156 (+) |
LOC118944376 | NA | other | downstream | 847578 | 13087702 ~ 13089271 (+) |
LOC110505390 | LOC106610772 | other | downstream | 1608440 | 13848535 ~ 13860898 (+) |
G1953696 | NA | other | downstream | 2113667 | 14353825 ~ 14354124 (+) |
tfb1m | LOC106610789 | other | downstream | 2741619 | 14947569 ~ 14994632 (+) |
G1954503 | NA | other | downstream | 2797988 | 15038146 ~ 15039536 (+) |