Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110504323 |
| gene name | LOC106610912 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 16517639 ~ 16521087 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| trypsin-4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021583103.2 | False | 826 | mRNA | 0.44 | 5 | 16517639 | 16521080 |
| TU2236882 | False | 636 | TUCP | 0.44 | 4 | 16517640 | 16521087 |
| TU2236883 | True | 502 | TUCP | 0.46 | 3 | 16517640 | 16520667 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505434 | LOC106610816 | coding | upstream | 238761 | 16244284 ~ 16278878 (+) |
| LOC110505433 | srrm1 | coding | upstream | 279313 | 16221724 ~ 16238326 (+) |
| LOC110504320 | LOC106610813 | coding | upstream | 304413 | 16204181 ~ 16213226 (+) |
| LOC110505425 | LOC106610807 | coding | upstream | 431852 | 16075556 ~ 16085787 (+) |
| LOC110505424 | LOC106610806 | coding | upstream | 452954 | 16059437 ~ 16064685 (+) |
| LOC110505437 | LOC106610898 | coding | downstream | 34441 | 16555521 ~ 16566788 (+) |
| LOC110505441 | LOC106610895 | coding | downstream | 63203 | 16584283 ~ 16589274 (+) |
| maco1 | LOC106610893 | coding | downstream | 71488 | 16592568 ~ 16623685 (+) |
| LOC110505442 | arhb | coding | downstream | 107286 | 16628366 ~ 16683040 (+) |
| LOC110505444 | s100pbp | coding | downstream | 178444 | 16699524 ~ 16718452 (+) |
| G1956135 | NA | non-coding | upstream | 63471 | 16453916 ~ 16454168 (+) |
| G1955747 | NA | non-coding | upstream | 149936 | 16367303 ~ 16367703 (+) |
| G1955685 | NA | non-coding | upstream | 310680 | 16206703 ~ 16206959 (+) |
| G1955684 | NA | non-coding | upstream | 311320 | 16205989 ~ 16206319 (+) |
| G1955664 | NA | non-coding | upstream | 331930 | 16184579 ~ 16185709 (+) |
| G1956201 | NA | non-coding | downstream | 6262 | 16527342 ~ 16527542 (+) |
| G1956227 | NA | non-coding | downstream | 20313 | 16541393 ~ 16541602 (+) |
| G1956350 | NA | non-coding | downstream | 253884 | 16774964 ~ 16796273 (+) |
| G1956352 | NA | non-coding | downstream | 255108 | 16776188 ~ 16781083 (+) |
| G1956388 | NA | non-coding | downstream | 317745 | 16838825 ~ 16839041 (+) |
| ralgapa2 | ralgapa2 | other | upstream | 631241 | 15853873 ~ 16017012 (+) |
| G1954503 | NA | other | upstream | 1478103 | 15038146 ~ 15039536 (+) |
| tfb1m | LOC106610789 | other | upstream | 1523007 | 14947569 ~ 14994632 (+) |
| G1953696 | NA | other | upstream | 2163515 | 14353825 ~ 14354124 (+) |
| LOC110505390 | LOC106610772 | other | upstream | 2656741 | 13848535 ~ 13860898 (+) |
| G1956418 | NA | other | downstream | 369650 | 16890730 ~ 16891472 (+) |
| G1956836 | NA | other | downstream | 565856 | 17086936 ~ 17087404 (+) |
| LOC110504198 | mthfd1 | other | downstream | 833282 | 17349032 ~ 17366266 (+) |
| LOC110505477 | LOC106610865 | other | downstream | 1094397 | 17611871 ~ 17628031 (+) |
| G1957752 | LOC106610850 | other | downstream | 1427568 | 17948648 ~ 17953488 (+) |
