angel1 (LOC106611057)


Basic Information

Item Value
gene id angel1
gene name LOC106611057
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 19883468 ~ 19892721 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021584817.2
GGTTGTCATGCGCTTACAATAATGTTTCGATTCTTGCTTGAACCGTCGCTAAGATTATAGTTGGTTGTGGTCTTAGCAAAATAACTATTTTTAATGCAGCAGgtagctagaatgctaacgctcATTGACATTGGGTGTAGCAAAAGCTAGTCAATGggccattttactggttgaagtttaAGTGTTTTTGTAAGCATAATGCAGTTGATTTGCgatgatgacacaaacattatattaagcaggtCATTCATACGAGCCTTAAAGtccaattataatccaaaagtagtgtgaaCTGCACTAATTAGCTGGCATTCCATAGGAACTCGCGTGTTTTGCCACCACCTCGTGCAGCACTGTTTACAAACACATAAAAGGAGTCTATATTCCAACGTGCAGCTTTCTTGTTATCACTATAATGAAGTCTGCCACTGAGATGGTTGTAGTGTATGGGTTCACTTCTTTTTTAAAGACAATTATACATAATTAATGTGAGCATACCAGTGAGGGGATTCGATTAATCTGGCCCGGATGAAAGTTGATTGCATTCGTTTTGGAAACGGCCTGGCTGCCCTTGGGCATGAGGAACTGGGAACTCGGTGAAAAAACGAAAAAAAACTCGGGAGTTCTAGAAAGAATTCCGAGTTGAATGACCATTCAAAACGATGTTCCCAAGTCGGAACTATTTTCTTTCGCCGAGTACCCAGTtgtctgacttgcctagttaaatgttaAATACAAAACGCATTTAAATCAgaagtcggagatttccgagttcctaGTTGTTTTGAATAGGGAAAATGCCCACGTTAAATCGTgtcaaaacaaaagtgacatgTAAATTAAGCACATGGAGTAATGAACAGAATTCTTAGTTTTTTCAAAGGTGATTTTTTGATAAAACGCGTAATCTGCCTTCCAACTGAAAACTAGTTAGAcaattaaaacatattttatgGAAATGGATGTTTTGTTGAGAACATGACCTCGTGGCGCAGATTATGGTTCGATTTGAGAAGGGCACTCATCCCGTTCATATCACGGGCCATAGCCCGGTGCCCCGCGGCTCGGCATGATCGGGTCCGCCCAATCATTGGAGCGGAGCATGATTGGGAGCCTGATATTTTACGGGCTTTACCCGTTAACACGGCTTATAAACTGCGTCACAGAACCCTTGAAAAAGGGTCCCTCTGTGTCCATTAATGACAATAAGGTGTGGGATGGTGAAGTCCCTTCCAAAATATTTACTAAAACGCAGGCAGGCCTGCTGGATCCGTGGCTTAGTACAAGCAGCGGGCCCCCAAAGGCCAAGAAGGATCCTGGGAGAGTGACTGGGGAATGGTTGAAGGAGAACGGCGCACTAGAAAAAGAGAAGAGTAAAGAGGCAGAGATGAAGAAAAGCACTGTGAAAGAGGTGATGGGGTCTGAACCAGAGAAAGACAGGAAAGAGCCTGTATTCGTAACTCTGGGGGGTCGGCTGCTTGATGGAGTGAAGGAAGAGGAGCCAGAGGTGAGAGACGACGTGGAGGAGGACGGGGTCAGAGAGGAAGGTCCAAAGCAGCAGGACCAGGAGCAGACTATCCTCTACTCAGAGAAGCTCATGAGGGATGATGGCGTGCAGGAGGCTCCCTGTTCCCCCACAGAGAAGTCTGAGAACAGTAACCCAGCGCCGGAGCTAACAACAGAGACATCTGAAGTACAGAATCCATCAGTCAAGGACAGCAGGACAACAGACGATAAAGCGATTGTCCATGTCCTGTTAGAACAGATAGTGGAAAAGATGAGCATGGGAGAGTCAGTAACCAAGGCACAGGTGCAAAAACCGGAGTGGGAGAGCCAGACTGCAGCAGGACTAGACTTGAGCTCTTTTGTAGACCCACATGCAAGCACTAGTGAAGTGCCTGCTGAGATATGGGATCCTGGGCTGGACCTGGTCTCCCTTCTCTGTGAGGCAGAGGCCCAGACACAGCCATGGGAGAGTAGGGCTCAGCCCCCACCCAAGGGCTGGCATTTCCCCATCGGCCCTGGCTTGAAAGAGGTGTTGTTCTGCCCTTCCACAGCGTTCCCAAGCATGAGCTACTACCCACattcactggagagagagacctTCCAAGTGGTGTGGAGGGTGTGGGAGGAACTCAGTGAGACCCACACAGCGCCAGAGCCTCTCCAAAGGCCCCCCTCAGAACCCCGGCCCCTGTTTGACTTCACAGTGATGTCTTACAACATCCTTGCCCAGGACCTGCTGGAGGCCAACCAGGAGCTGTACACACACTGCCCTCTAGGGGTGTTGAGCTGGGACTACCGCTTCCCAAACCTCACACAGGAGTTCAAGAAATGGGAACCAGATATCCTTTGTCTGCAAGAGGTCCAGGAGAACCACTTTACAGAGCAACTCCATCCTGTCCTTCGTGACATGGGCTACACCTGTGTTTACAAGCGGCGCACCGGCACCAAGACTGATGGCTGTGTGATTTGTTACCGCGGCGACCGTTTCTCCCAGGTGTCAGAGAGTCTGCTGGAGTTCTACAGGCCAGAGTGTGAGCTGCTGGACCGAGACAACGTGGGCATTGTCCTGCTGCTCCAGCCAATTATCACACAGGGGTCAGAAGTCACTGCCAAGGGCCCACCCCTCTGTGTGGCAACCACCCACCTCCTGTTCAACACCAGGAGGGGTGACGTGAAGCTGACCCAGCTTGCAATGCTGCTGGCAGAGATCGACTACATCGTGAGGAACTGCAAGGTGAAGGGAGAGCACTGCAATGTTGTTCTATGTGGAGACTTCAATGCTCTACCCAACATGCCTCTGTACCAACTGATCACGACAAGACAGCTTTACTATCATGGTCTACCTGCCTGGATGATATCAGGTCAAGAGGATCTGTCCTACAACGTCCATCATAGAAGGGTATTCGCTCCCCTTTGGCCAAGCACCGTGGGCATCGATGACAACTGCCAGTACACAACTGTAAATGAGCCAAAGAGTCAAATCACGTCAACCCAGAGTCCAGAACGGAACCTGCAGTACAACCATGGCTTCCTGCGTCGGCTGCGTTTCTGTGAGGCTGCCTGTATCCGGCCACAGGACCTGGAGCTCATTCCAGGGGTCACTGACAACAcacctgATCCTGAGGACAAGCATCCTTATACAACAAGGTTCAGACAGACTATCTCCCATTACCTGAACCTGCGGTCAGCCTACGGCCACTTCATCCCTGGAACAGACCGTGCTGAGGTGACCACGCTGCACTCCGAGGTTGGAGCTACAGTCGACTACATCTTCTACTCTCCAAGGCGTGGCATTTCTGGTGCTTATCAGAAAGGTGGAGGTCAACGGCAGAGCCAAGGTCTGAAGCTGCTTGGTCGTCTCTCCCTCCTACCAGAGGAGGACCTCTGGTCAATGAACGGTTTACCCAATGAAATGTTCCCCTCGGACCACCTCAGTCTCCTGGCCAAGTTCCAGCTGGACCTGAATCCTGTGTGATTTGGGCTGTCTATGGTCAATGAAGAATCAGGAGGACAGAGGTCAAGCATTTAAACATTTTTGTTCAAACCTTACATGATTTGCCCATGGCACAATTCCATGTTTAAAAGTGAATACTTACTTGGTCCCTGGGGCTCACAGAGAGTTTTGAGTCCCATCTAATACTCTGCTTGTTTCCTACATGAAGAAAAACTACTCAGCCCAATTTCCAGAAGAGATGGGATGTCCTCTGAATGATAATATTTGTTTACATGTATAGAGAAAAAATAACCAAAAAGGTTAGATTCAGTTAGTTGGAGTTTATTTGACAAATGCTCTTACTGTTAAGATATGAATACAAGAAGCTTTTAGATTTAAAGGTTTATGGGGATTTTGTTTACTCAGTTTGTTCACAATCTGCTACACTAGTAAATTGGAACATTTGTCTTAAAACATTTACAAACTGTGAAATAATTGAATGTCAATGTTTTCTATTTATTTAGCTGTTTTCCCCCCTATCCTCTGTCTTTGGTCCAGTCAGTATTATTTGTTCAAATGGTAGAAATCTTAAATAAATCTAACAATAGCTTGGCAGTCTAATTAAGGTGATCTACATCATCTTTGGGTGTTAAAATTGTGACCTGAATGTTGGCAGTGCCACACTGAGATGGAAGCTCTCTCGCTCTACTGAGGCACTCTGTCAAGGAGAAGATGAGTGTGGCTGGCTGAGGCATGAATCAATTATTCATTCAGGTTGCAGGAAGGGAGCATTCATGCATGCTAGGGCACTGTCggggcctttgtgtgtgtgtgtgtgtgtgtacactgcagTCTAGACCAGGGTTTTCCCAACTCAGTCCTACGACtccccctgggtgcacgtttttgtttttgccctagcaatACATAgccgattcaaataatcaaaacttgagttggttatttgaatcagctgtgtagtgcttgggCAAAACCAAAAGGTACACCGGGCAGGGGGGttcccaggactgagtttgggaaagcCTGGTCTAGAGGAACAGCCAACAGACTCCTGTCAACACTAAGACCTCTAGTTATAGCTCACTGGAATGACACAAATGTCAAGGTCTGACACTTCCTTTAGTCTAACTACAATAAATCAGGTGTTCTCTCTCA

Function

NR:

description
protein angel homolog 1-like isoform X1

GO: NA

KEGG:

id description
K18729 ANGEL; protein angel

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021584817.2 True 4615 mRNA 0.47 10 19883468 19892721

Neighbor

gene id symbol gene type direction distance location
LOC110505533 LOC106611059 coding downstream 20587 19827909 ~ 19862881 (-)
LOC110505531 LOC106611061 coding downstream 90468 19647103 ~ 19793000 (-)
pomt2 pomt2 coding downstream 241461 19633477 ~ 19642007 (-)
LOC100136175 LOC106611063 coding downstream 250673 19612109 ~ 19632795 (-)
LOC110505529 LOC106611064 coding downstream 276037 19600234 ~ 19607431 (-)
LOC110505539 dlst coding upstream 24873 19917594 ~ 19926699 (-)
LOC110505541 LOC106611051 coding upstream 90502 19983223 ~ 20048442 (-)
LOC110505542 gpatch2l coding upstream 209037 20101758 ~ 20141822 (-)
LOC110505544 ift43 coding upstream 272447 20165168 ~ 20198478 (-)
LOC110505546 LOC106611046 coding upstream 433476 20326197 ~ 20357077 (-)
G1960181 NA non-coding downstream 75552 19799744 ~ 19807916 (-)
G1960177 NA non-coding downstream 87380 19795766 ~ 19796088 (-)
G1960162 NA non-coding downstream 104827 19778441 ~ 19778641 (-)
G1960145 NA non-coding downstream 132622 19750593 ~ 19750846 (-)
G1960139 NA non-coding downstream 138909 19744269 ~ 19744559 (-)
G1960242 NA non-coding upstream 34827 19927548 ~ 19927801 (-)
G1960270 NA non-coding upstream 84744 19977465 ~ 19977672 (-)
G1960604 tgfb3 non-coding upstream 317483 20210204 ~ 20219857 (-)
G1960671 NA non-coding upstream 415836 20308557 ~ 20308871 (-)
G1960681 NA non-coding upstream 420350 20313071 ~ 20313278 (-)
G1959757 NA other downstream 338585 19544430 ~ 19544883 (-)
exd1 LOC106611069 other downstream 420407 19459418 ~ 19472995 (-)
LOC110505524 LOC106611070 other downstream 465619 19412027 ~ 19421296 (-)
G1959632 NA other downstream 487904 19385737 ~ 19395564 (-)
LOC110505513 LOC106578354 other downstream 799705 19078852 ~ 19092504 (-)
G1961046 NA other upstream 456071 20348792 ~ 20413709 (-)
acyp1 acyp1 other upstream 513681 20406401 ~ 20407806 (-)
G1961081 NA other upstream 521083 20413804 ~ 20414118 (-)
LOC110505560 LOC106611035 other upstream 613504 20506225 ~ 20510972 (-)

Expression


Co-expression Network