LOC110505630


Basic Information

Item Value
gene id LOC110505630
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 22678700 ~ 22680020 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110505630
TCATAGTGGCTTTGAGGCGAGCCTTGCATTTAGTTTTCAAAGTGGGAGACAGAAGCAAAACGGCCGCCTTTCACCGAGATATGCTCGGCATGAAGATTGTGCTTCACAAAGAGTTTGAAGAAGGATGTAAGGCAACTTGTAAGGGCCCTAATGATGGAAAATGGAGCAAGACAATGGTCGGCTTGGGGCCAGAGGATGATGACATCGTGACTGAACTCATCTACAATTATGGAGTGGGAGAATATCGCCACGGTAATGACTTCCTCGGTTTGACTTTGCAGTCTTGCCAGGCTGTCAGCAATGCTAAGCGTCTTGGTTGGCCCCTCACTGAGGTTTGAAAGGGCCTCTATCTGGCTGAGGCCCCAGGAGGTTATTGCTTCTACCTGGTGGACAAAGAAACAGCCTCCCAATGATCCTGTACAGAAGGTGTGTCTGGCAGGGTCTGACCAGCAGAAATCAACACAATACACTGCTGCTCCTCCCTTCTGGGGATGAAGGTGAACAGGGGAAATGAGAAGACTGTGCTGATGGGATTCTGATGGGATTCACAGACACTCACTGTAAACTAGAGCTTCACAACATTGTTGGGACAGCCTTCAGGCGGATAGCATTCTCCTGTCCACATGAGCAGTGGGCAGATCTTGAAGCCTTGATGACAAAGAGTAAGGATTTCATGGTTTCCATCTTAGTTAGCCTGGACACCCCTGGGAAGACTACAGGTCATTTGGGCTGATTCAGATGCCCGTGAGATCTGCTTTGTTGTTtgagtgtttattgtgttgtgggTTCCCAGACACAAGTTCTTTAAATCTCTCTGTTTTCGCGAATTCGTCTTTTGACCAATCGgtgactagtccaacgctctaaccactaggctaccctgccgcccctatgtGAACAGAGCCTTTAGTGTTTCTGTGTATGTTGCAGTACCCTCTCCTTTCTTTTTCCCCATAGGGTTTTCATGTCAAATAACAATGTATTCAAAGTGcctactattatattctaactatagaattataataataattagtgttttgatctaaatcgcAAGTCAAATTGCAATTGCAagatttggttaaaaataaggcttCATTTTTTTTTGGACAATATCCTGCAGAACTATGTGACAATGTGGAATTGCAGCAATTGATGAcattattttaaaacaaatgtaaataaaaattaaaaatgtaaaaagcaaATTTACAATTTGTATTATTCAAAAGCATCAAATACCGACATACTGTGAAAATTTGGAAAAATACAGTGAtgtgatattttggccatatcgcccatccctactatccatataggccaa

Function

NR:

description
PREDICTED: glyoxalase domain-containing protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110505630 True 1321 mRNA 0.43 1 22678700 22680020

Neighbor

gene id symbol gene type direction distance location
prkcha LOC100380676 coding upstream 23349 22604288 ~ 22655351 (+)
slc38a6 slc38a6 coding upstream 92742 22572457 ~ 22585958 (+)
mnat1 mnat1 coding upstream 108713 22512594 ~ 22569987 (+)
six6a six6 coding upstream 204711 22465681 ~ 22473989 (+)
ppm1aa LOC106610975 coding upstream 291990 22372957 ~ 22386710 (+)
LOC110505633 LOC106610968 coding downstream 47709 22727729 ~ 22731299 (+)
LOC110504329 LOC105895945 coding downstream 84677 22764658 ~ 22768365 (+)
LOC110504209 NA coding downstream 90542 22770562 ~ 22780040 (+)
LOC110505634 2a5e coding downstream 113064 22793084 ~ 22865803 (+)
wdr89 wdr89 coding downstream 115456 22795476 ~ 22798055 (+)
G1963328 NA non-coding upstream 81709 22596553 ~ 22596991 (+)
G1963272 NA non-coding upstream 171061 22506682 ~ 22507639 (+)
G1963250 NA non-coding upstream 185210 22493280 ~ 22493490 (+)
G1963240 NA non-coding upstream 190600 22487870 ~ 22488100 (+)
G1963227 NA non-coding upstream 201153 22477301 ~ 22477547 (+)
G1963317 NA non-coding downstream 17669 22697689 ~ 22699363 (+)
G1963551 NA non-coding downstream 93421 22773441 ~ 22773648 (+)
G1963552 NA non-coding downstream 93656 22773676 ~ 22773930 (+)
G1963573 NA non-coding downstream 106018 22786038 ~ 22786497 (+)
G1962949 NA other upstream 285744 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 367899 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 404037 22250058 ~ 22274663 (+)
LOC110505603 LOC106610998 other upstream 810667 21838453 ~ 21886964 (+)
G1962316 NA other upstream 834690 21792183 ~ 21844010 (+)
G1963734 NA other downstream 237926 22917946 ~ 22918686 (+)
G1964177 NA other downstream 925914 23605934 ~ 23613765 (+)
G1964499 NA other downstream 1396501 24076521 ~ 24076721 (+)
G1965262 NA other downstream 1680417 24360437 ~ 24360985 (+)
G1965263 NA other downstream 1681068 24361088 ~ 24361482 (+)

Expression


Co-expression Network