Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110505649 |
| gene name | LOC106610953 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 23531467 ~ 23549311 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| exocyst complex component 3-like protein 4 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021585011.2 | False | 3684 | mRNA | 0.47 | 15 | 23531467 | 23548998 |
| XM_021585012.2 | False | 4124 | mRNA | 0.47 | 14 | 23531467 | 23549311 |
| XM_021585010.2 | False | 3323 | mRNA | 0.48 | 13 | 23531470 | 23547324 |
| XM_021585009.2 | True | 3837 | mRNA | 0.47 | 14 | 23531470 | 23548994 |
23,530,000
23,532,000
23,534,000
23,536,000
23,538,000
23,540,000
23,542,000
23,544,000
23,546,000
23,548,000
23,550,000
23,552,000
23,554,000
23,556,000
23,558,000
23,560,000
23,562,000
23,564,000
23,566,000
23,568,000
23,570,000
NC_048589.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136135 | LOC106610954 | coding | downstream | 4267 | 23519410 ~ 23527200 (-) |
| if5 | if5 | coding | downstream | 22067 | 23502834 ~ 23509400 (-) |
| LOC110505645 | LOC106610955 | coding | downstream | 29533 | 23462235 ~ 23501934 (-) |
| trmt61a | trm61 | coding | downstream | 75183 | 23442922 ~ 23456284 (-) |
| LOC110505642 | klc1 | coding | downstream | 138388 | 23357655 ~ 23393079 (-) |
| LOC110505650 | LOC106611086 | coding | upstream | 39938 | 23589249 ~ 23592525 (-) |
| LOC110504212 | LOC106586451 | coding | upstream | 56562 | 23605873 ~ 23626905 (-) |
| LOC118944143 | NA | coding | upstream | 95822 | 23645133 ~ 23649017 (-) |
| LOC110505651 | LOC106610950 | coding | upstream | 104911 | 23654222 ~ 23659341 (-) |
| LOC110505652 | LOC106599624 | coding | upstream | 113681 | 23662992 ~ 23691460 (-) |
| G1964749 | NA | non-coding | downstream | 55508 | 23475674 ~ 23475959 (-) |
| G1964743 | NA | non-coding | downstream | 89701 | 23441554 ~ 23441766 (-) |
| G1964742 | NA | non-coding | downstream | 90228 | 23440953 ~ 23441239 (-) |
| G1964741 | NA | non-coding | downstream | 90636 | 23440607 ~ 23440831 (-) |
| G1964739 | NA | non-coding | downstream | 92548 | 23438584 ~ 23438919 (-) |
| G1964794 | NA | non-coding | upstream | 20471 | 23569782 ~ 23575887 (-) |
| G1964813 | NA | non-coding | upstream | 47707 | 23597018 ~ 23597227 (-) |
| G1964835 | NA | non-coding | upstream | 100890 | 23650201 ~ 23650874 (-) |
| G1964509 | NA | non-coding | upstream | 155369 | 23704680 ~ 23706779 (-) |
| LOC118944134 | NA | non-coding | upstream | 158558 | 23707726 ~ 23725668 (-) |
| G1964728 | NA | other | downstream | 102823 | 23425563 ~ 23428841 (-) |
| G1964592 | LOC106569888 | other | downstream | 308964 | 23221973 ~ 23222503 (-) |
| G1964564 | NA | other | downstream | 363354 | 23165032 ~ 23168113 (-) |
| G1963846 | NA | other | downstream | 485763 | 23036891 ~ 23045704 (-) |
| G1962803 | LOC106610988 | other | downstream | 1434971 | 22095519 ~ 22096496 (-) |
| G1967882 | NA | other | upstream | 2986053 | 26535364 ~ 26538708 (-) |
| LOC110505716 | LOC106024658 | other | upstream | 3167373 | 26716542 ~ 26765410 (-) |
| G1969699 | LOC100380709 | other | upstream | 4550610 | 28099921 ~ 28101436 (-) |
| G1969724 | NA | other | upstream | 4594127 | 28143438 ~ 28143762 (-) |
| G1970606 | NA | other | upstream | 5308629 | 28857940 ~ 28861987 (-) |
