LOC110505665 (ampm1)


Basic Information

Item Value
gene id LOC110505665
gene name ampm1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 23972896 ~ 23991462 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036962981.1
caGTTTCGTTTTGCAACGAAAGCGATAGTTTCTTTTGAATGAATTCAGGTAGCTCCCTCCCGGGTTCGTTCCGTTTGGTTCtatttggttcctagtgaatccACCCCGTTCAACGTGACAGGTCCTCTTTGGGcatagGCAGCGCTCGCGAGGTTCTCTCCAGCTGACAGATCGTCCAGTCCACTCCCCAGTCTCCACCCCTCCAGACTGCAGGCATGGCGGCTATCGAGGCTCGGGAATGCGAAACTGAAGGCTGTAGCAGCAAGGCCAAACTTCAATGTCCAACCTGCATCAAGCTCGGGATCCAAGGCTCATACTTCTGCTCTCAGGAGTGCTTCAAAGGGAGCTGGGCCACTCACAAGCAGCTGCACAAAAAAGCAAAGGAGGATAACCAGGATGAGGCAAAGAACTGCGTGGAGACCGACACCAACACAGACCCATGGCCTGGCTACCGCTACACGGGCAGACTACGCCCTCACTACCCACTCACTCCGATGAGGACTGTCCCCAGTGACATCCAAAGACCTGACTATGCTGATCATCCACTAGCAGCAGAAGTGGGTCTTATGGCAGgcatGTCTGAGTCGGAGCAGTCTTTGAAGGGCACTTCACAGATCAAGATCCTTCCTGCCGAAGACATTGAAGGCATGAGAGTTGTGTCTACGCTGGCCCGAGAGGTGCTTGACATTGCCGCCCTGATGGTGAAACCTGGCATGACCACGGAAGAGATTGACCACACTGTGCACCTGGCCTGCACAGCCAGAAACTGTTACCCCTCCCCTCTCAACTACTACAACTTTCCCAAGTCCTGCTGCACGTCAGTCAATGAGGTCATCTGCCACGGCATCCCAGACAGGAGACGTCTGGTGGATGGGGATATCCTCAACGTGGATATTACTGTGTACCACAATGGATTCCACGGAGATCTCAACGAGACCTTCTTTGTCGGAGAGGCAGATGAAGGGGCGAAAAAGCTTGTCCAGACCACCTTTGAATGCCTTATGCAAGCCATCGACTCAGTAAAGCCTGGTATCCGCTACAGGGAGCTCGGTAACATCATCCAGAAACATGCCCAGGCTAACGGCTTCTCTGTGGTGCGGAGCTACTGTGGCCATGGCATCCACAAACTGTTCCACACTGCTCCTAACGTGCCCCACTATGCCAAAAACAAAGCGGTCGGAGTGATGAAACCTGGCCATGTATTCACCATCGAGCCCATGATCTGTGAAGGTGGTTGGCAGGACGAGACGTGGCCTGATGGCTGGACAGCTGTGACTCGGGATGGGAAGCGTTCCGCCCAGTTTGAGCACACCTTGCTTGTGACGGAGACGGGCTGTGACATTCTGACACGCCGGCTGGACGACAACGGGCGTCCCCACTTCCTCAACCAAATCTAAATGGGGGGAGGGATACAGCAACGAAATGACTGTCTCGTGTGCAGCTCACTTTGATCCCCAATGTCATATCACACATACACGCCTCTAACCTGAGGCACGCCGCccgcctgcccccccccccccccccggaggcTGTCCCTGCCGCGGCCTGGCTCTCACCGTTCCACGAATTTAGTGTTGTTCTCCAAGATTTACGGGAAGTACTTGAATACATCTGATATCAACTGTGTGGATTGTTTTAATGAggctgttttaaaaaataaatgtctcATCAGGAGAtgaaaagtaaaaataaagaagtgTATTTATGCGCAGTAGCAGGTTTAATTTTTACCTTGATTGTGAGCTTTGATTCTGTTGACATATTTGACTGCAGAGGTGTGGAAAGGGTCATGCTTCAGTTTGACTCCTTGACCTCTAGACATGTGCCACCTTACTGTGTTGCCTAATTGACAGCAAGGCAGCTGGGTCCGAGAGGACTGGCCAGAGAGGCCAGAGAGGGGAGCTGTTGAGCTCAGTGTTCTGCTAAAGTGTGTAGTGCAGGTCTATTCAAACCTGGGTCCTGAGGTCTGCAGCACTGCTggttttcttttctctctctctctagtgaactAGTTGATTTAGGTTCATTGATTGACCAGAATCTCCTTGCCAGGTCTGGTTTGAATCGGGAGGAAAGCCTGCAGTGCGGTGGACCCCAAGGTCTGGATTAGAATTGCCCTGGTGTAGCGCGTTGAGCCTTAATCTGTGTGAATTAAGAATAACCATGCCAGATAATGTCTAGGCAGCATGTCTGTTATTCCTCAATCCAGTCAATCAATATTTACCTTGATATACTGTTGAGCAACACTCTTGAGTCTCCATTTTAATCCAATCTTTCCAGTTTCTCTGCCAGCTTTTTATTTCTTCTATGATGGGAGTAATAAACAGCTGttctgtagttgtgtgtgtgtgtgcgtatatgcTTTTGTGTTTGAGTGTGGTGAGGACTGTATAAATGCCAAAGGCTCTATTGCAGCAGAAGTCTGGGTTTACTACAGACCTGTGAATTAATACCCTTTTTCAGAGTACTGTATTAAAATAGTAATAACATAA
>XM_036962980.1
ATAATTATGTGCACAGGCAGCGCTCGCGAGGTTCTCTCCAGCTGACAGATCGTCCAGTCCACTCCCCAGTCTCCACCCCTCCAGACTGCAGGCATGGCGGCTATCGAGGCTCGGGAATGCGAAACTGAAGGCTGTAGCAGCAAGGCCAAACTTCAATGTCCAACCTGCATCAAGCTCGGGATCCAAGGCTCATACTTCTGCTCTCAGGAGTGCTTCAAAGGGAGCTGGGCCACTCACAAGCAGCTGCACAAAAAAGCAAAGGAGGATAACCAGGATGAGGCAAAGAACTGCGTGGAGACCGACACCAACACAGACCCATGGCCTGGCTACCGCTACACGGGCAGACTACGCCCTCACTACCCACTCACTCCGATGAGGACTGTCCCCAGTGACATCCAAAGACCTGACTATGCTGATCATCCACTAGCAGCAGAAGTGGGTCTTATGGCAGgcatGTCTGAGTCGGAGCAGTCTTTGAAGGGCACTTCACAGATCAAGATCCTTCCTGCCGAAGACATTGAAGGCATGAGAGTTGTGTCTACGCTGGCCCGAGAGGTGCTTGACATTGCCGCCCTGATGGTGAAACCTGGCATGACCACGGAAGAGATTGACCACACTGTGCACCTGGCCTGCACAGCCAGAAACTGTTACCCCTCCCCTCTCAACTACTACAACTTTCCCAAGTCCTGCTGCACGTCAGTCAATGAGGTCATCTGCCACGGCATCCCAGACAGGAGACGTCTGGTGGATGGGGATATCCTCAACGTGGATATTACTGTGTACCACAATGGATTCCACGGAGATCTCAACGAGACCTTCTTTGTCGGAGAGGCAGATGAAGGGGCGAAAAAGCTTGTCCAGACCACCTTTGAATGCCTTATGCAAGCCATCGACTCAGTAAAGCCTGGTATCCGCTACAGGGAGCTCGGTAACATCATCCAGAAACATGCCCAGGCTAACGGCTTCTCTGTGGTGCGGAGCTACTGTGGCCATGGCATCCACAAACTGTTCCACACTGCTCCTAACGTGCCCCACTATGCCAAAAACAAAGCGGTCGGAGTGATGAAACCTGGCCATGTATTCACCATCGAGCCCATGATCTGTGAAGGTGGTTGGCAGGACGAGACGTGGCCTGATGGCTGGACAGCTGTGACTCGGGATGGGAAGCGTTCCGCCCAGTTTGAGCACACCTTGCTTGTGACGGAGACGGGCTGTGACATTCTGACACGCCGGCTGGACGACAACGGGCGTCCCCACTTCCTCAACCAAATCTAAATGGGGGGAGGGATACAGCAACGAAATGACTGTCTCGTGTGCAGCTCACTTTGATCCCCAATGTCATATCACACATACACGCCTCTAACCTGAGGCACGCCGCccgcctgcccccccccccccccccggaggcTGTCCCTGCCGCGGCCTGGCTCTCACCGTTCCACGAATTTAGTGTTGTTCTCCAAGATTTACGGGAAGTACTTGAATACATCTGATATCAACTGTGTGGATTGTTTTAATGAggctgttttaaaaaataaatgtctcATCAGGAGAtgaaaagtaaaaataaagaagtgTATTTATGCGCAGTAGCAGGTTTAATTTTTACCTTGATTGTGAGCTTTGATTCTGTTGACATATTTGACTGCAGAGGTGTGGAAAGGGTCATGCTTCAGTTTGACTCCTTGACCTCTAGACATGTGCCACCTTACTGTGTTGCCTAATTGACAGCAAGGCAGCTGGGTCCGAGAGGACTGGCCAGAGAGGCCAGAGAGGGGAGCTGTTGAGCTCAGTGTTCTGCTAAAGTGTGTAGTGCAGGTCTATTCAAACCTGGGTCCTGAGGTCTGCAGCACTGCTggttttcttttctctctctctctagtgaactAGTTGATTTAGGTTCATTGATTGACCAGAATCTCCTTGCCAGGTCTGGTTTGAATCGGGAGGAAAGCCTGCAGTGCGGTGGACCCCAAGGTCTGGATTAGAATTGCCCTGGTGTAGCGCGTTGAGCCTTAATCTGTGTGAATTAAGAATAACCATGCCAGATAATGTCTAGGCAGCATGTCTGTTATTCCTCAATCCAGTCAATCAATATTTACCTTGATATACTGTTGAGCAACACTCTTGAGTCTCCATTTTAATCCAATCTTTCCAGTTTCTCTGCCAGCTTTTTATTTCTTCTATGATGGGAGTAATAAACAGCTGttctgtagttgtgtgtgtgtgtgcgtatatgcTTTTGTGTTTGAGTGTGGTGAGGACTGTATAAATGCCAAAGGCTCTATTGCAGCAGAAGTCTGGGTTTACTACAGACCTGTGAATTAATACCCTTTTTCAGAGTACTGTATTAAAATAGTAATAACATAAT
>XM_036962982.1
ATTATGTGCACAGGCAGCGCTCGCGAGGTTCTCTCCAGCTGACAGATCGTCCAGTCCACTCCCCAGTCTCCACCCCTCCAGACTGCAGGCATGGCGGCTATCGAGGCTCGGGAATGCGAAACTGAAGGCTGTAGCAGCAAGGCCAAACTTCAATGTCCAACCTGCATCAAGCTCGGGATCCAAGGCTCATACTTCTGCTCTCAGGAGTGCTTCAAAGGGAGCTGGGCCACTCACAAGCAGCTGCACAAAAAAGCAAAGGAGGATAACCAGGATGAGGCAAAGAACTGCGTGGAGACCGACACCAACACAGACCCATGGCCTGGCTACCGCTACACGGGCAGACTACGCCCTCACTACCCACTCACTCCGATGAGGACTGTCCCCAGTGACATCCAAAGACCTGACTATGCTGATCATCCACTAGgcatGTCTGAGTCGGAGCAGTCTTTGAAGGGCACTTCACAGATCAAGATCCTTCCTGCCGAAGACATTGAAGGCATGAGAGTTGTGTCTACGCTGGCCCGAGAGGTGCTTGACATTGCCGCCCTGATGGTGAAACCTGGCATGACCACGGAAGAGATTGACCACACTGTGCACCTGGCCTGCACAGCCAGAAACTGTTACCCCTCCCCTCTCAACTACTACAACTTTCCCAAGTCCTGCTGCACGTCAGTCAATGAGGTCATCTGCCACGGCATCCCAGACAGGAGACGTCTGGTGGATGGGGATATCCTCAACGTGGATATTACTGTGTACCACAATGGATTCCACGGAGATCTCAACGAGACCTTCTTTGTCGGAGAGGCAGATGAAGGGGCGAAAAAGCTTGTCCAGACCACCTTTGAATGCCTTATGCAAGCCATCGACTCAGTAAAGCCTGGTATCCGCTACAGGGAGCTCGGTAACATCATCCAGAAACATGCCCAGGCTAACGGCTTCTCTGTGGTGCGGAGCTACTGTGGCCATGGCATCCACAAACTGTTCCACACTGCTCCTAACGTGCCCCACTATGCCAAAAACAAAGCGGTCGGAGTGATGAAACCTGGCCATGTATTCACCATCGAGCCCATGATCTGTGAAGGTGGTTGGCAGGACGAGACGTGGCCTGATGGCTGGACAGCTGTGACTCGGGATGGGAAGCGTTCCGCCCAGTTTGAGCACACCTTGCTTGTGACGGAGACGGGCTGTGACATTCTGACACGCCGGCTGGACGACAACGGGCGTCCCCACTTCCTCAACCAAATCTAAATGGGGGGAGGGATACAGCAACGAAATGACTGTCTCGTGTGCAGCTCACTTTGATCCCCAATGTCATATCACACATACACGCCTCTAACCTGAGGCACGCCGCccgcctgcccccccccccccccccggaggcTGTCCCTGCCGCGGCCTGGCTCTCACCGTTCCACGAATTTAGTGTTGTTCTCCAAGATTTACGGGAAGTACTTGAATACATCTGATATCAACTGTGTGGATTGTTTTAATGAggctgttttaaaaaataaatgtctcATCAGGAGAtgaaaagtaaaaataaagaagtgTATTTATGCGCAGTAGCAGGTTTAATTTTTACCTTGATTGTGAGCTTTGATTCTGTTGACATATTTGACTGCAGAGGTGTGGAAAGGGTCATGCTTCAGTTTGACTCCTTGACCTCTAGACATGTGCCACCTTACTGTGTTGCCTAATTGACAGCAAGGCAGCTGGGTCCGAGAGGACTGGCCAGAGAGGCCAGAGAGGGGAGCTGTTGAGCTCAGTGTTCTGCTAAAGTGTGTAGTGCAGGTCTATTCAAACCTGGGTCCTGAGGTCTGCAGCACTGCTggttttcttttctctctctctctagtgaactAGTTGATTTAGGTTCATTGATTGACCAGAATCTCCTTGCCAGGTCTGGTTTGAATCGGGAGGAAAGCCTGCAGTGCGGTGGACCCCAAGGTCTGGATTAGAATTGCCCTGGTGTAGCGCGTTGAGCCTTAATCTGTGTGAATTAAGAATAACCATGCCAGATAATGTCTAGGCAGCATGTCTGTTATTCCTCAATCCAGTCAATCAATATTTACCTTGATATACTGTTGAGCAACACTCTTGAGTCTCCATTTTAATCCAATCTTTCCAGTTTCTCTGCCAGCTTTTTATTTCTTCTATGATGGGAGTAATAAACAGCTGttctgtagttgtgtgtgtgtgtgcgtatatgcTTTTGTGTTTGAGTGTGGTGAGGACTGTATAAATGCCAAAGGCTCTATTGCAGCAGAAGTCTGGGTTTACTACAGACCTGTGAATTAATACCCTTTTTCAGAGTACTGTATTAAAATAGTAATAACATAAT

Function

NR:

description
methionine aminopeptidase 1-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005737 cytoplasm cellular_component
GO:0004177 aminopeptidase activity molecular_function
GO:0046872 metal ion binding molecular_function
GO:0008235 metalloexopeptidase activity molecular_function

KEGG:

id description
K01265 map; methionyl aminopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036962981.1 False 2492 mRNA 0.50 13 23972896 23991461
XM_036962980.1 False 2371 mRNA 0.50 12 23973326 23991462
XM_036962982.1 True 2344 mRNA 0.50 11 23973329 23991462

Neighbor

gene id symbol gene type direction distance location
LOC110504213 NA coding upstream 211593 23756983 ~ 23761303 (+)
LOC110505657 cdc5l coding upstream 226570 23737748 ~ 23746326 (+)
napba LOC106610947 coding upstream 247227 23718491 ~ 23725669 (+)
hao1 hao1 coding upstream 265545 23704664 ~ 23707351 (+)
LOC110505653 LOC106610949 coding upstream 268422 23696473 ~ 23704474 (+)
enpep LOC106610934 coding downstream 41420 24032882 ~ 24058913 (+)
LOC110505673 NA coding downstream 87259 24078721 ~ 24080745 (+)
LOC110505676 LOC106610929 coding downstream 243816 24235278 ~ 24289662 (+)
LOC110505678 LOC106611137 coding downstream 322012 24313474 ~ 24355303 (+)
zgc:123321 yipf5 coding downstream 384365 24375827 ~ 24378263 (+)
G1964385 NA non-coding upstream 9228 23892004 ~ 23963668 (+)
G1964377 NA non-coding upstream 20951 23883282 ~ 23951945 (+)
G1964309 LOC106610942 non-coding upstream 167676 23804484 ~ 23805220 (+)
G1964290 LOC106610943 non-coding upstream 181147 23787358 ~ 23791749 (+)
G1964303 NA non-coding upstream 186317 23786368 ~ 23786579 (+)
G1964442 NA non-coding downstream 1867 23993329 ~ 23993603 (+)
G1964443 NA non-coding downstream 2543 23994005 ~ 23994253 (+)
G1964445 NA non-coding downstream 3689 23995151 ~ 23995555 (+)
G1964467 NA non-coding downstream 28465 24019927 ~ 24020152 (+)
G1964468 NA non-coding downstream 28779 24020241 ~ 24020560 (+)
G1964177 NA other upstream 359131 23605934 ~ 23613765 (+)
G1963734 NA other upstream 1054210 22917946 ~ 22918686 (+)
G1962949 NA other upstream 1579940 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 1662095 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 1698233 22250058 ~ 22274663 (+)
G1964499 NA other downstream 85059 24076521 ~ 24076721 (+)
G1965262 NA other downstream 368975 24360437 ~ 24360985 (+)
G1965263 NA other downstream 369626 24361088 ~ 24361482 (+)
G1965396 NA other downstream 574269 24565731 ~ 24567147 (+)
LOC110505697 ypel5 other downstream 797665 24788926 ~ 24791594 (+)

Expression


Co-expression Network