LOC110504216


Basic Information

Item Value
gene id LOC110504216
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 25999701 ~ 26089364 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036962269.1
ATGACTGTGATTGCTGCAGATGAAACCAACTGTGAACCAAATGTTATGACAAAGACGCCTGACATTATCCTGGAGGTGCCAATTGCTGTGGAAGACCATATCGTCCACTGGATTGAGAGAAGGGCCTTGTTTGGGCATGACCACAGCTTTTGCACCTACCTGAACAAGCAGTTCTATAGCTACTGGAAAAGGTTTGGTCCAGGACTGGTCATCCACAGGCATGGTTTCATTGAAGAGCTggacagccagagagacagagtcattCTGCTCAAAGACTGCTTACCCTCTGATATCGTGACCGTCTGCCACGGGAACAGCCCAGTcacaactgactgactgaccggctAACACTGAC

Function

NR:

description
uncharacterized protein C15orf41 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036962269.1 True 355 mRNA 0.49 3 25999701 26089364

Neighbor

gene id symbol gene type direction distance location
LOC110505705 vdac2 coding upstream 422730 25575962 ~ 25576971 (+)
LOC110505701 LOC106611118 coding upstream 669917 25221998 ~ 25329784 (+)
LOC110504215 LOC106611119 coding upstream 813834 25118159 ~ 25185867 (+)
LOC110504214 LOC106601609 coding upstream 887764 25044862 ~ 25111937 (+)
LOC110505697 ypel5 coding upstream 1208107 24788926 ~ 24791594 (+)
LOC110505710 spred1 coding downstream 347751 26437115 ~ 26520383 (+)
LOC110505712 LOC106611156 coding downstream 438286 26527650 ~ 26534059 (+)
LOC110504217 LOC106601399 coding downstream 493495 26582859 ~ 26623165 (+)
LOC118944312 NA coding downstream 812413 26901777 ~ 26904037 (+)
LOC110505720 LOC106611151 coding downstream 862776 26952140 ~ 26953607 (+)
G1967250 NA non-coding upstream 14135 25985180 ~ 25985566 (+)
G1967245 NA non-coding upstream 19566 25979922 ~ 25980135 (+)
G1967188 NA non-coding upstream 64673 25934823 ~ 25935028 (+)
G1967185 NA non-coding upstream 66548 25932954 ~ 25933153 (+)
G1967179 NA non-coding upstream 71973 25927407 ~ 25927728 (+)
G1967332 NA non-coding downstream 7875 26097239 ~ 26097440 (+)
G1967342 NA non-coding downstream 15139 26104503 ~ 26104711 (+)
G1967393 NA non-coding downstream 120194 26209558 ~ 26210003 (+)
G1967411 NA non-coding downstream 146165 26235529 ~ 26235744 (+)
G1967412 NA non-coding downstream 146932 26236296 ~ 26236525 (+)
G1967032 NA other upstream 166380 25831576 ~ 25833321 (+)
G1965396 NA other upstream 1432554 24565731 ~ 24567147 (+)
G1965263 NA other upstream 1638219 24361088 ~ 24361482 (+)
G1965262 NA other upstream 1638716 24360437 ~ 24360985 (+)
G1967965 NA other downstream 565541 26654905 ~ 26655336 (+)
LOC110505721 ccdc88c other downstream 899475 26988390 ~ 27099710 (+)
G1970001 NA other downstream 2324236 28413600 ~ 28413919 (+)
G1971104 NA other downstream 3384756 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 4234149 30092455 ~ 30330735 (+)

Expression


Co-expression Network