XLOC_000384 (sts)


Basic Information

Item Value
gene id XLOC_000384
gene name sts
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 32051581 ~ 32077473 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000652
ATATCATCAACCTGAATGTTTACTCTACACTAGACTAGAGCATGTTGAGCATTAACTGACATCTGCGGATAGATTTACGTTTCTGACAAGCCTAAGTGATCTATCCCGTCCAGGGTGCAGGCTGTACAATGAAATCCTTTCAATGGATTCCCTGCACTTTCTGTCTGCTGCTCTATACTGCTGATGCCGGCAGTGGTACAAAACCTAATTTTGTCTTTATGATGGTGGACGATTTAGGAATTGGAGACCTTGGATGCTATGGAAACACAACTCTCagGACGCCCAACATTGACAGACTGGCTCTGGAAGGGGTGAAACTGACCCAACACATTGCTGCTGCGCCACTCTGCACTCCCAGCAGGGCAGCCTTTCTCACAGGCAGATATCCCATCCGATCAGgTATGGCAGCACATGGCCATATGGGAGTGTTTCTCTTTTCTGCATCGTCAGGAGGTCTTCCACAAGAGGAAATCACCTTTGCCAAGGCTGTCAAGGTGCAAGGTTATTCCACCGCTGTAATTGggaaatGGCACCTTGGTCTTAACTGTGAAGACAGTTCTGACCACTGCCACCATCCAAACTCACATGGCTTCGACTACTTCTATGGTACCATTATGACGCACCTTCGGGACTGCCAGCCTGGACATGGCTCTGTCTTGTATAACGTTTATAGTCACATCCCATTCAAGCCCCTTAGTATCGGTTTAGTTTCCCTAGTAGTACTCCATATTAGAGGGATGCTAACTGTGAGCAGGAGGGTATTTTTCAGTTTTCTGATCCTGGTAGGGCTGGTGCTGAGTCTCTTTCGTTTGTTAGTATACACATTCCCCAATCTAAATTGCTTTGTCATGAGAGGAACGGAAATTGTGGAACAACCATATATCTCAGAAAACCTCACACAAAGGATGACCAGTGAAGCCATAGAGTTTCTGGAAAGGAATTCAGAGACCCCATTCTTGCTCTTCTTCTCATTTATTCAAGTCCACACAGGAGTTTTTGCCTCTCCTCTCTTCAGGGGAAGGAGCCAACATGGCCTCTATGGTGATGCTGTCATGGAAGTAGACTGGAGTGTAGgTCAGATCATGCAGACTCTGGAGCGCTTAAACTTGAAGGACAACACTCTAGTGTACATGACCTCAGATCAGGGGCCTCACCTGGAAGAGATTTCAGTCCACGGAGAGATGCATGGGGGCTATAGCGGCATATACAAAGCTGGCAAGTCAACTAACTGGGAAGGAGGAATCCGAATTCCGGGCATTCTTAGTTGGCCAGGTGTCTTACCCGCCGGGAATATCATCGATGAGCCCACTAGTAACATGGATATTTTCCCTACGGTCTTGAATTTAGCTGGTGCTTCCATACCCGATGACAGAGTCATCGATGGTCATGATCTTTTGCCACTTCTGCAAGGGCAAGTGAAGCGTTCTGAACATGAACTCTTGTTTCATTACTGCAATGCTGAACTGAATGCTGTCAGATGGCGCCCACCCAACAGTAGTGCAATTTGGAAGGCCTTTTTCTTTACCCCTGACTTCTACCCAAAGAACAGCTCGGCATGTTTCCACACTCATGTCTGCTTCTGCATCAAGCCATTCGTCACGTTTCATGATCCTCCGCTGCTTTATGACCTATCCAAAGACCCAACAGAAAGCACCCCCCTGAGTCCCGACACCGAGCCTCAGTTCCACTCAGTTCTAGAGGTCATAAGAGCCGCAGTAAGCCGTCATACACAGAGCCTGAAACCTGTCCCAGTGCAGGTCTCTCCTCTGAAAATAGTGTGGAAGCCTTGGCTCCAGCCCTGCTGTTCTTCTCTCAGTCAGCTGTGCAGGTGTGAACGAGATCATCAGATAGAGAAGGTACAGGACGGGCTTCAAAAAGAATAGTCTGCTGCTCAGAATCATAAGGGCATGTAATACGTAAAGGAATAGTTCCCTCAAAGCTGaaaaattctttcatcattttcaAACCtttcaaatgttgttttaaaactttttcttctgtggaacataaaaaatataaaaatactatgAAGAATGTTAATAATAATCTGATGGTTTTGGTGATCATTGGCATGTTccaagaagaaaaacaaacaaacaaacaatgcattgtagggctgcacgattctggctaaaatgagaatcacatttttttttttttttac
>TCONS_00000653
GACTAGAGCATGTTGAGCATTAACTGACATCTGCGGATAGATTTACGTTTCTGACAAGCCTAAGTGATCTATCCCGTCCAGGGTGCAGGAATTGGAGACCTTGGATGCTATGGAAACACAACTCTCagGACGCCCAACATTGACAGACTGGCTCTGGAAGGGGTGAAACTGACCCAACACATTGCTGCTGCGCCACTCTGCACTCCCAGCAGGGCAGCCTTTCTCACAGGCAGATATCCCATCCGATCAGgTATGGCAGCACATGGCCATATGGGAGTGTTTCTCTTTTCTGCATCGTCAGGAGGTCTTCCACAAGAGGAAATCACCTTTGCCAAGGCTGTCAAGGTGCAAGGTTATTCCACCGCTGTAATTGggaaatGGCACCTTGGTCTTAACTGTGAAGACAGTTCTGACCACTGCCACCATCCAAACTCACATGGCTTCGACTACTTCTATGGTACCATTATGACGCACCTTCGGGACTGCCAGCCTGGACATGGCTCTGTCTTGTA
>TCONS_00000654
TGCACTGAAAacaaatattcattggatttactaaacaGTTTTAtgtgctaaatttaaacaaacaaattaaaattaacttacttaattttatttgttttaattcaaccCATATACATTCCTTGCAACCAGTTACTTCAAAGAAAagttgtaaatccaatgaatcatatACTTTTTAAGTCTACAAACATGTGAAAATGTTAGgaaaacctacaaaatttctgATTTTCCATATCAGGGCATGCAAAAATTATCTGATAATTAGCAATAAAACCTCAGGTGAACAACAACATAAAAGTAAGTTAGGCACAACTTACTAAAATACCATGTGCAACACAGATCAGAATGTCTGTTCATCAGCTAATGTTGTAGCAGTTTGTTGGTCTGGAGCTGCATGTTAACACCAAGCCCATCCCGTAGCTAAAACTTAGCCAAAAGTGGGTCATGCAACAAGACAATGCCAAGCACACCAGCAAATCTACAACGGAACCACTGGGGAGAAAAATGGTGTTGCAATAGTTCAGTCCAAAGCTGATCTTTTCCTTGCTTTGGCAATACTGggcagaaagcaaaaaaaaaaaaaaaaaaaaaaaaaagaaagaaagaaagaaaactcacCAGAATGAACTGAGAGACTGATGAGATTATACAGAAATTGATTAAAGTATTGCTACGAAAACTGGATCTGCTACAGGCATCCGAATCAGTGGGTGTCCTAAGTTTCGCTTTACTTCTGTTAGTAAATACTGACACTTTTATGATGTTGTTCATCTGAGTATTTACTTTCTAAATTGTAAGATCAATACAATATTTTAGCAATGATTTTTTTAGTTCATGTGcagcataatttatttatttttttaaatgctaaaggTATGGCAGCACATGGCCATATGGGAGTGTTTCTCTTTTCTGCATCGTCAGGAGGTCTTCCACAAGAGGAAATCACCTTTGCCAAGGCTGTCAAGGTGCAAGGTTATTCCACCGCTGTAATTGggaaatGGCACCTTGGTCTTAACTGTGAAGACAGTTCTGACCACTGCCACCATCCAAACTCACATGGCTTCGACTACTTCTATGGTACCATTATGACGCACCTTCGGGACTGCCAGCCTGGACATGGCTCTGTCTTGTATAACGTTTATAGTCACATCCCATTCAAGCCCCTTAGTATCGGTTTAGTTTCCCTAGTAGTACTCCATATTAGAGGGATGCTAACTGTGAGCAGGAGGGTATTTTTCAGTTTTCTGATCCTGGTAGGGCTGGTGCTGAGTCTCTTTCGTTTGTTAGTATACACATTCCCCAATCTAAATTGCTTTGTCATGAGAGGAACGGAAATTGTGGAACAACCATATATCTCAGAAAACCTCACACAAAGGATGACCAGTGAAGCCATAGAGTTTCTGGAAAGGAATTCAGAGACCCCATTCTTGCTCTTCTTCTCATTTATTCAAGTCCACACAGGAGTTTTTGCCTCTCCTCTCTTCAGGGGAAGGAGCCAACATGGCCTCTATGGTGATGCTGTCATGGAAGTAGACTGGAGTGTAGgTCAGATCATGCAGACTCTGGAGCGCTTAAACTTGAAGGACAACACTCTAGTGTACATGACCTCAGATCAGGGGCCTCACCTGGAAGAGATTTCAGTCCACGGAGAGATGCATGGGGGCTATAGCGGCATATACAAAGCTGGCAAGTCAACTAACTGGGAAGGAGGAATCCGAATTCCGGGCATTCTTAGTTGGCCAGGTGTCTTACCCGCCGGGAATATCATCGATGAGCCCACTAGTAACATGGATATTTTCCCTACGGTCTTGAATTTAGCTGGTGCTTCCATACCCGATGACAGGTGA

Function

symbol description
sts Enables steryl-sulfatase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in X-linked ichthyosis. Orthologous to human STS (steroid sulfatase).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004773 steryl-sulfatase activity molecular_function
GO:0008484 sulfuric ester hydrolase activity molecular_function
GO:0004065 arylsulfatase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
ko01009 Protein phosphatases and associated proteins
ko01008 Polyketide biosynthesis proteins

ZFIN:

id description
ZDB-GENE-030717-5 Enables steryl-sulfatase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in X-linked ichthyosis. Orthologous to human STS (steroid sulfatase).

Ensembl:

ensembl_id ENSDARG00000053241

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000652 False 2164 mRNA 0.46 10 32051581 32077473
TCONS_00000653 False 512 processed_transcript 0.51 5 32051613 32065030
TCONS_00000654 True 1847 mRNA 0.40 5 32054159 32074141

Neighbor

gene id symbol gene type direction distance location
XLOC_000383 BX901898.1 coding upstream 33466 32017437 ~ 32018115 (+)
XLOC_000382 BX901898.2 coding upstream 37094 32013688 ~ 32014487 (+)
XLOC_000381 NA coding upstream 39203 32011880 ~ 32012378 (+)
XLOC_000380 NA coding upstream 39787 32010262 ~ 32011794 (+)
XLOC_000379 anos1a coding upstream 72071 31942961 ~ 31979510 (+)
XLOC_000385 pudp coding downstream 264011 32341484 ~ 32385665 (+)
XLOC_000386 CU462859.1 coding downstream 436516 32513989 ~ 32514104 (+)
XLOC_000387 nlgn4xa coding downstream 443996 32521469 ~ 32693950 (+)
XLOC_000388 CU915272.1 coding downstream 628636 32706109 ~ 32706227 (+)
XLOC_000389 zgc:174320 coding downstream 714447 32791920 ~ 32793644 (+)
XLOC_000371 CT573247.1 non-coding upstream 530609 31519239 ~ 31520972 (+)
XLOC_000370 NA non-coding upstream 692262 31354585 ~ 31359319 (+)
XLOC_000390 BX322647.1 non-coding downstream 1137768 33215241 ~ 33216718 (+)
XLOC_000394 NA non-coding downstream 1440329 33517802 ~ 33518823 (+)
XLOC_000400 CU915566.1 non-coding downstream 1657545 33735018 ~ 33735134 (+)

Expression


Co-expression Network