LOC110505757 (cinp)


Basic Information

Item Value
gene id LOC110505757
gene name cinp
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 29326274 ~ 29334901 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021585184.2
TTTCACTGGTGCCGACAGTCTGTCACAGACCCAGAAGAAGAAATATGCGGAAGTTGACTttggaagaaatgtgtgtttcagAAAGCACAAGAGTACTTCAATAAACTAACTTAACTTGAATAGTATAAACAATAACAATGGAAGTAGGCCTACAAGGATCAGAGACGACCACTCCTGGCAGAAAGTCCCAGTCTGCAGTGACTGGCAGTGCAAGGAAAGTGAAGGACAACGCAGCAGACTGGCACAATCTGATTCTGAAGTGGGACCGACTGAATGATGAAGGATCCACCATGGCAAATAAGATAGTCAATTTAGGATTCAATAAAAGTTCACAGAAAGAGATGCAAGTCATGATGGCGGGTCAGGACACCTCTGCCAGCTCTAATTCAGAGAATGCTTTTGAAAACAGTAGAGAACTAGAAGAGGAGTGTGACAAGTTGCTAAGTGTCGTGGACAAAATGACTCATATTGTATCAAAAATGGAGAAGTTAGTTTCCTCTGAGAAGGGGATCGTCGATCTAGAGACATTCCAGTATGGAACAGGAGGAAGACAAACTCCTTTGTTTCAGACCTGGCCTACGTCACAGTTCGACGTCTCCAACAAGCTCTATGAAGCATACAAGCAAGAACTGACTCTGAAACGGGCTATTCTTCAGGAGCTAGCTCACACAACTAACCCAGACCTTTCAATGGTGTACCTGTCCTGCTGGCTGTATCAGCCGTACACAGATGACAGGGCAAAGTTACTGTTAGAGGGTCTTCTTTTAGAGACAGGGCATAGGCCAATTTAACCAACTTCAGTTGGAACATTATATTTTGTTTATGGACTTATGGCTACTGTACTAACAAGTCCATAAATAAATGACAACTACTGTATGGCCATTACAAAGGAACTCATGCACAGCAATGCTGCTGGTTTCAACTCCATGAAATAATAGAATGATTTGGTTCTCGCATCCTTTATTAGGAAAATGAGTTCAACTGTACAGCATATGAAATGGTTGTATTGCAACAATGAGTCACAAATGAAACATGGAAATGAATAACCACAATTTCTTAACTTTTGATTTTATTTCCCCTCATTTGCATTCATTTTCAATGGTATTAGAAACCTATTTTTTGAAAATGTTACACCCAAATATATAAAAAGTAATAAAATAGTGCAACATT
>XM_021585182.2
TCACTGGTGCCGACAGTCTGTCACAGACCCAGAAGAAGAAATATGCGGAAGTTGACTttggaagaaatgtgtgtttcagAAAGCACAAGAGTACTTCAATAAACTAACTTAACTTGAATAGTATAAACAATAACAATGGAAGTAGGCCTACAAGGATCAGAGACGACCACTCCTGGCAGAAAGTCCCAGTCTGCAGTGACTGGCAGTGCAAGGAAAGTGAAGGACAACGCAGCAGACTGGCACAATCTGATTCTGAAGTGGGACCGACTGAATGATGAAGGATCCACCATGGCAAATAAGATAGTCAATTTAGGATTCAATAAAAGTTCACAGAAAGAGATGCAAGTCATGATGGCGGGTCAGGACACCTCTGCCAGCTCTAATTCAGAGAATGCTTTTGAAAACAGTAGAGAACTAGAAGAGGAGTGTGACAAGTTGCTAAGTGTCGTGGACAAAATGACTCATATTGTATCAAAAATGGAGAAGTTAGTTTCCTCTGAGAAGGGGATCGTCGATCTAGAGACATTCCAGTATGGAACAGGAGGAAGACAAACTCCTTTGTTTCAGACCTGGCCTACGTCACAGTTCGCAGACGTCTCCAACAAGCTCTATGAAGCATACAAGCAAGAACTGACTCTGAAACGGGCTATTCTTCAGGAGCTAGCTCACACAACTAACCCAGACCTTTCAATGGTGTACCTGTCCTGCTGGCTGTATCAGCCGTACACAGATGACAGGGCAAAGTTACTGTTAGAGGGTCTTCTTTTAGAGACAGGGCATAGGCCAATTTAACCAACTTCAGTTGGAACATTATATTTTGTTTATGGACTTATGGCTACTGTACTAACAAGTCCATAAATAAATGACAACTACTGTATGGCCATTACAAAGGAACTCATGCACAGCAATGCTGCTGGTTTCAACTCCATGAAATAATAGAATGATTTGGTTCTCGCATCCTTTATTAGGAAAATGAGTTCAACTGTACAGCATATGAAATGGTTGTATTGCAACAATGAGTCACAAATGAAACATGGAAATGAATAACCACAATTTCTTAACTTTTGATTTTATTTCCCCTCATTTGCATTCATTTTCAATGGTATTAGAAACCTATTTTTTGAAAATGTTACACCCAAATATATAAAAAGTAATAAAATAGTGCAAC
>XM_021585183.2
ACAGACCCAGAAGAAGAAATATGCGGAAGTTGACTttggaagaaatgtgtgtttcagAAAGCACAAGAGTACTTCAATAAACTAACTTAACTTGAATAGTATAAACAATAACAATGGAAGGCCTACAAGGATCAGAGACGACCACTCCTGGCAGAAAGTCCCAGTCTGCAGTGACTGGCAGTGCAAGGAAAGTGAAGGACAACGCAGCAGACTGGCACAATCTGATTCTGAAGTGGGACCGACTGAATGATGAAGGATCCACCATGGCAAATAAGATAGTCAATTTAGGATTCAATAAAAGTTCACAGAAAGAGATGCAAGTCATGATGGCGGGTCAGGACACCTCTGCCAGCTCTAATTCAGAGAATGCTTTTGAAAACAGTAGAGAACTAGAAGAGGAGTGTGACAAGTTGCTAAGTGTCGTGGACAAAATGACTCATATTGTATCAAAAATGGAGAAGTTAGTTTCCTCTGAGAAGGGGATCGTCGATCTAGAGACATTCCAGTATGGAACAGGAGGAAGACAAACTCCTTTGTTTCAGACCTGGCCTACGTCACAGTTCGCAGACGTCTCCAACAAGCTCTATGAAGCATACAAGCAAGAACTGACTCTGAAACGGGCTATTCTTCAGGAGCTAGCTCACACAACTAACCCAGACCTTTCAATGGTGTACCTGTCCTGCTGGCTGTATCAGCCGTACACAGATGACAGGGCAAAGTTACTGTTAGAGGGTCTTCTTTTAGAGACAGGGCATAGGCCAATTTAACCAACTTCAGTTGGAACATTATATTTTGTTTATGGACTTATGGCTACTGTACTAACAAGTCCATAAATAAATGACAACTACTGTATGGCCATTACAAAGGAACTCATGCACAGCAATGCTGCTGGTTTCAACTCCATGAAATAATAGAATGATTTGGTTCTCGCATCCTTTATTAGGAAAATGAGTTCAACTGTACAGCATATGAAATGGTTGTATTGCAACAATGAGTCACAAATGAAACATGGAAATGAATAACCACAATTTCTTAACTTTTGATTTTATTTCCCCTCATTTGCATTCATTTTCAATGGTATTAGAAACCTATTTTTTGAAAATGTTACACCCAAATATATAAAAAGTAATAAAATAGTGCAACATT
>XM_021585180.2
TATGCGGAAGTTGACTttggaagaaatgtgtgtttcagAAAGCACAAGAGTACTTCAATAAACTAACTTAACTTGAATAGTATAAACAATAACAATGGAAGGTAAGGCAATAACTCCAGTCTTGTGTTAGCGAATGAGGTGGATGGTGTTAACAAATTCAATGCTAGCTTCGAACGATGCCCTGGACCGGAGGTAGCAAGCTACTAGGTCTGGGTGATATGGAGAAAATATATCACGGTATTAAAAAATATTACGGCCTACAAGGATCAGAGACGACCACTCCTGGCAGAAAGTCCCAGTCTGCAGTGACTGGCAGTGCAAGGAAAGTGAAGGACAACGCAGCAGACTGGCACAATCTGATTCTGAAGTGGGACCGACTGAATGATGAAGGATCCACCATGGCAAATAAGATAGTCAATTTAGGATTCAATAAAAGTTCACAGAAAGAGATGCAAGTCATGATGGCGGGTCAGGACACCTCTGCCAGCTCTAATTCAGAGAATGCTTTTGAAAACAGTAGAGAACTAGAAGAGGAGTGTGACAAGTTGCTAAGTGTCGTGGACAAAATGACTCATATTGTATCAAAAATGGAGAAGTTAGTTTCCTCTGAGAAGGGGATCGTCGATCTAGAGACATTCCAGTATGGAACAGGAGGAAGACAAACTCCTTTGTTTCAGACCTGGCCTACGTCACAGTTCGCAGACGTCTCCAACAAGCTCTATGAAGCATACAAGCAAGAACTGACTCTGAAACGGGCTATTCTTCAGGAGCTAGCTCACACAACTAACCCAGACCTTTCAATGGTGTACCTGTCCTGCTGGCTGTATCAGCCGTACACAGATGACAGGGCAAAGTTACTGTTAGAGGGTCTTCTTTTAGAGACAGGGCATAGGCCAATTTAACCAACTTCAGTTGGAACATTATATTTTGTTTATGGACTTATGGCTACTGTACTAACAAGTCCATAAATAAATGACAACTACTGTATGGCCATTACAAAGGAACTCATGCACAGCAATGCTGCTGGTTTCAACTCCATGAAATAATAGAATGATTTGGTTCTCGCATCCTTTATTAGGAAAATGAGTTCAACTGTACAGCATATGAAATGGTTGTATTGCAACAATGAGTCACAAATGAAACATGGAAATGAATAACCACAATTTCTTAACTTTTGATTTTATTTCCCCTCATTTGCATTCATTTTCAATGGTATTAGAAACCTATTTTTTGAAAATGTTACACCCAAATATATAAAAAGTAATAAAATAGTGCAACATT
>XM_036962677.1
TGCTAGCTTCGAACGATGCCCTGGACCGGAGGTAGCAAGCTACTAGGTCTGGGTGATATGGAGAAAATATATCACGGTATTAAAAAATATTACGTAGGCCTACAAGGATCAGAGACGACCACTCCTGGCAGAAAGTCCCAGTCTGCAGTGACTGGCAGTGCAAGGAAAGTGAAGGACAACGCAGCAGACTGGCACAATCTGATTCTGAAGTGGGACCGACTGAATGATGAAGGATCCACCATGGCAAATAAGATAGTCAATTTAGGATTCAATAAAAGTTCACAGAAAGAGATGCAAGTCATGATGGCGGGTCAGGACACCTCTGCCAGCTCTAATTCAGAGAATGCTTTTGAAAACAGTAGAGAACTAGAAGAGGAGTGTGACAAGTTGCTAAGTGTCGTGGACAAAATGACTCATATTGTATCAAAAATGGAGAAGTTAGTTTCCTCTGAGAAGGGGATCGTCGATCTAGAGACATTCCAGTATGGAACAGGAGGAAGACAAACTCCTTTGTTTCAGACCTGGCCTACGTCACAGTTCGCAGACGTCTCCAACAAGCTCTATGAAGCATACAAGCAAGAACTGACTCTGAAACGGGCTATTCTTCAGGAGCTAGCTCACACAACTAACCCAGACCTTTCAATGGTGTACCTGTCCTGCTGGCTGTATCAGCCGTACACAGATGACAGGGCAAAGTTACTGTTAGAGGGTCTTCTTTTAGAGACAGGGCATAGGCCAATTTAACCAACTTCAGTTGGAACATTATATTTTGTTTATGGACTTATGGCTACTGTACTAACAAGTCCATAAATAAATGACAACTACTGTATGGCCATTACAAAGGAACTCATGCACAGCAATGCTGCTGGTTTCAACTCCATGAAATAATAGAATGATTTGGTTCTCGCATCCTTTATTAGGAAAATGAGTTCAACTGTACAGCATATGAAATGGTTGTATTGCAACAATGAGTCACAAATGAAACATGGAAATGAATAACCACAATTTCTTAACTTTTGATTTTATTTCCCCTCATTTGCATTCATTTTCAATGGTATTAGAAACCTATTTTTTGAAAATGTTACACCCAAATATATAAAAAGTAATAAAATAGTGCAACATT
>XM_036962676.1
ggggagggctttgtatgcatcgcagaagttTGAGTAGCAGTGGTCAAGTGTTTTACCCCCACCCgtagtgcaatcaatatgctgatagaatttaggtagccttgttctcaaatttgctttgttcaaatccccagctacaataaatgcatcctcaggatatatggtttccactTTATATCGAGTCAGTGAAGTTTCTTTAGGGCTGTCTTAGTGTCTGCTTGAGGTGTTATGTATCCAGATGTGACGATAACTGACGAGAATTATCTTGGAAGGTAATATGGCCGGCATTTGATAgtgaggaattctaggttgggtgagcggaaggacttgagttcctgtatgttgttatgattacaccgtgagtcgttaatcatgacgGCGCGATGCATGGGGAAGCCCAgtggctgaaccgattccgacaatgtatcccgagagagccatgtttctgtgaaacagagaatgtagcaatctctgatgtctctctggaaggcaccCTTGCTCTAATTTCGTCTTtgaccttgttgtcaagagactggacattggcgagtagtatacttggaagcggtgggcgatgtgcacgtctatggagcctgaccaggccgctccgtctgccccttctgcgccGCCGTTGTCTTGGGTCGgctctgggattagatccattgtcctgggtggtggtccaaacagaggatccgcttcgggaaagtcatattcctggtcgtaatgttgTAGGCCTACAAGGATCAGAGACGACCACTCCTGGCAGAAAGTCCCAGTCTGCAGTGACTGGCAGTGCAAGGAAAGTGAAGGACAACGCAGCAGACTGGCACAATCTGATTCTGAAGTGGGACCGACTGAATGATGAAGGATCCACCATGGCAAATAAGATAGTCAATTTAGGATTCAATAAAAGTTCACAGAAAGAGATGCAAGTCATGATGGCGGGTCAGGACACCTCTGCCAGCTCTAATTCAGAGAATGCTTTTGAAAACAGTAGAGAACTAGAAGAGGAGTGTGACAAGTTGCTAAGTGTCGTGGACAAAATGACTCATATTGTATCAAAAATGGAGAAGTTAGTTTCCTCTGAGAAGGGGATCGTCGATCTAGAGACATTCCAGTATGGAACAGGAGGAAGACAAACTCCTTTGTTTCAGACCTGGCCTACGTCACAGTTCGACGTCTCCAACAAGCTCTATGAAGCATACAAGCAAGAACTGACTCTGAAACGGGCTATTCTTCAGGAGCTAGCTCACACAACTAACCCAGACCTTTCAATGGTGTACCTGTCCTGCTGGCTGTATCAGCCGTACACAGATGACAGGGCAAAGTTACTGTTAGAGGGTCTTCTTTTAGAGACAGGGCATAGGCCAATTTAACCAACTTCAGTTGGAACATTATATTTTGTTTATGGACTTATGGCTACTGTACTAACAAGTCCATAAATAAATGACAACTACTGTATGGCCATTACAAAGGAACTCATGCACAGCAATGCTGCTGGTTTCAACTCCATGAAATAATAGAATGATTTGGTTCTCGCATCCTTTATTAGGAAAATGAGTTCAACTGTACAGCATATGAAATGGTTGTATTGCAACAATGAGTCACAAATGAAACATGGAAATGAATAACCACAATTTCTTAACTTTTGATTTTATTTCCCCTCATTTGCATTCATTTTCAATGGTATTAGAAACCTATTTTTTGAAAATGTTACACCCAAATATATAAAAAGTAATAAAATAGTGCAACATT
>XM_036962675.1
ggctttgtatgcatcgcagaagttTGAGTAGCAGTGGTCAAGTGTTTTACCCCCACCCgtagtgcaatcaatatgctgatagaatttaggtagccttgttctcaaatttgctttgttcaaatccccagctacaataaatgcatcctcaggatatatggtttccactTTATATCGAGTCAGTGAAGTTTCTTTAGGGCTGTCTTAGTGTCTGCTTGAGGTGTTATGTATCCAGATGTGACGATAACTGACGAGAATTATCTTGGAAGGTAATATGGCCGGCATTTGATAgtgaggaattctaggttgggtgagcggaaggacttgagttcctgtatgttgttatgattacaccgtgagtcgttaatcatgacgGCGCGATGCATGGGGAAGCCCAgtggctgaaccgattccgacaatgtatcccgagagagccatgtttctgtgaaacagagaatgtagcaatctctgatgtctctctggaaggcaccCTTGCTCTAATTTCGTCTTtgaccttgttgtcaagagactggacattggcgagtagtatacttggaagcggtgggcgatgtgcacgtctatggagcctgaccaggccgctccgtctgccccttctgcgccGCCGTTGTCTTGGGTCGgctctgggattagatccattgtcctgggtggtggtccaaacagaggatccgcttcgggaaagtcatattcctggtcgtaatgttgTAGGCCTACAAGGATCAGAGACGACCACTCCTGGCAGAAAGTCCCAGTCTGCAGTGACTGGCAGTGCAAGGAAAGTGAAGGACAACGCAGCAGACTGGCACAATCTGATTCTGAAGTGGGACCGACTGAATGATGAAGGATCCACCATGGCAAATAAGATAGTCAATTTAGGATTCAATAAAAGTTCACAGAAAGAGATGCAAGTCATGATGGCGGGTCAGGACACCTCTGCCAGCTCTAATTCAGAGAATGCTTTTGAAAACAGTAGAGAACTAGAAGAGGAGTGTGACAAGTTGCTAAGTGTCGTGGACAAAATGACTCATATTGTATCAAAAATGGAGAAGTTAGTTTCCTCTGAGAAGGGGATCGTCGATCTAGAGACATTCCAGTATGGAACAGGAGGAAGACAAACTCCTTTGTTTCAGACCTGGCCTACGTCACAGTTCGCAGACGTCTCCAACAAGCTCTATGAAGCATACAAGCAAGAACTGACTCTGAAACGGGCTATTCTTCAGGAGCTAGCTCACACAACTAACCCAGACCTTTCAATGGTGTACCTGTCCTGCTGGCTGTATCAGCCGTACACAGATGACAGGGCAAAGTTACTGTTAGAGGGTCTTCTTTTAGAGACAGGGCATAGGCCAATTTAACCAACTTCAGTTGGAACATTATATTTTGTTTATGGACTTATGGCTACTGTACTAACAAGTCCATAAATAAATGACAACTACTGTATGGCCATTACAAAGGAACTCATGCACAGCAATGCTGCTGGTTTCAACTCCATGAAATAATAGAATGATTTGGTTCTCGCATCCTTTATTAGGAAAATGAGTTCAACTGTACAGCATATGAAATGGTTGTATTGCAACAATGAGTCACAAATGAAACATGGAAATGAATAACCACAATTTCTTAACTTTTGATTTTATTTCCCCTCATTTGCATTCATTTTCAATGGTATTAGAAACCTATTTTTTGAAAATGTTACACCCAAATATATAAAAAGTAATAAAATAGTGCAACATT

Function

symbol description
cinp Orthologous to human CINP (cyclin dependent kinase 2 interacting protein).

NR:

description
cyclin-dependent kinase 2-interacting protein isoform X3

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021585184.2 False 1170 mRNA 0.40 5 29326274 29334901
XM_021585182.2 False 1168 mRNA 0.40 5 29326276 29334898
XM_021585183.2 False 1146 mRNA 0.40 5 29326298 29334901
XM_021585180.2 False 1281 mRNA 0.40 5 29326317 29334901
XM_036962677.1 False 1123 mRNA 0.41 5 29326478 29334901
XM_036962676.1 False 1752 mRNA 0.44 5 29328540 29334901
XM_036962675.1 True 1749 mRNA 0.43 5 29328546 29334901

Neighbor

gene id symbol gene type direction distance location
adprs adprhl2 coding upstream 101 29321334 ~ 29326173 (+)
gjb9a LOC106611221 coding upstream 51666 29272002 ~ 29274608 (+)
LOC110505748 gpr135 coding upstream 193349 29129043 ~ 29136833 (+)
ccdc175 LOC106611218 coding upstream 212610 29106207 ~ 29114965 (+)
LOC110504335 LOC106611218 coding upstream 220232 29101062 ~ 29106042 (+)
LOC110505758 tecpr2 coding downstream 7550 29342451 ~ 29377849 (+)
LOC110505760 rcor1 coding downstream 46812 29381713 ~ 29392098 (+)
LOC110505762 traf3 coding downstream 57655 29392556 ~ 29405607 (+)
LOC110505763 ehd4 coding downstream 73906 29408807 ~ 29451622 (+)
LOC110505764 LOC106611199 coding downstream 187789 29522690 ~ 29525076 (+)
G1971091 LOC100194703 non-coding upstream 11971 29313881 ~ 29314303 (+)
G1971088 LOC106611192 non-coding upstream 15625 29310153 ~ 29310649 (+)
G1971073 NA non-coding upstream 36438 29283882 ~ 29289836 (+)
G1971071 NA non-coding upstream 44187 29281884 ~ 29282087 (+)
G1971066 NA non-coding upstream 49543 29276108 ~ 29276731 (+)
G1971354 NA non-coding downstream 187421 29522322 ~ 29522574 (+)
G1971365 NA non-coding downstream 195273 29530174 ~ 29530374 (+)
G1971376 NA non-coding downstream 202368 29537269 ~ 29537535 (+)
G1971380 NA non-coding downstream 204166 29539067 ~ 29539326 (+)
G1971389 NA non-coding downstream 210175 29545076 ~ 29545490 (+)
G1970001 NA other upstream 912355 28413600 ~ 28413919 (+)
LOC110505721 ccdc88c other upstream 2237958 26988390 ~ 27099710 (+)
G1967965 NA other upstream 2670938 26654905 ~ 26655336 (+)
G1967032 NA other upstream 3492953 25831576 ~ 25833321 (+)
LOC110505697 ypel5 other upstream 4534680 24788926 ~ 24791594 (+)
G1971104 NA other downstream 139219 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 988612 30092455 ~ 30330735 (+)
G1972242 NA other downstream 1295427 30630328 ~ 30632667 (+)
G1972244 NA other downstream 1302153 30637054 ~ 30655039 (+)
G1972245 NA other downstream 1324503 30659404 ~ 30679995 (+)

Expression


Co-expression Network