Gene
RNA
| Item | Value |
|---|---|
| gene id | znf839 |
| gene name | znf839 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 29334672 ~ 29339921 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| znf839 | Predicted to enable metal ion binding activity. Orthologous to human ZNF839 (zinc finger protein 839). |
| description |
|---|
| uncharacterized protein LOC110505754 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021585174.2 | False | 3787 | mRNA | 0.48 | 8 | 29334672 | 29339921 |
| XM_021585175.2 | True | 3784 | mRNA | 0.48 | 8 | 29334672 | 29339921 |
29,328,000
29,329,000
29,330,000
29,331,000
29,332,000
29,333,000
29,334,000
29,335,000
29,335,000
29,336,000
29,337,000
29,338,000
29,339,000
29,340,000
29,341,000
29,342,000
NC_048589.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-266o15.1 | LOC106611192 | coding | downstream | 13664 | 29290704 ~ 29321008 (-) |
| ptp4a2a | LOC106611191 | coding | downstream | 63792 | 29267052 ~ 29270880 (-) |
| LOC110505749 | NA | coding | downstream | 67797 | 29220723 ~ 29266875 (-) |
| LOC110504220 | LOC106601062 | coding | downstream | 112940 | 29217381 ~ 29221732 (-) |
| daam1a | daam1 | coding | downstream | 128450 | 29135361 ~ 29206222 (-) |
| LOC110505761 | ankrd9 | coding | upstream | 38358 | 29378279 ~ 29380539 (-) |
| LOC110505765 | LOC106611200 | coding | upstream | 376681 | 29716602 ~ 29766891 (-) |
| LOC118944366 | NA | coding | upstream | 498353 | 29838274 ~ 29857889 (-) |
| LOC110505769 | LOC106611207 | coding | upstream | 578360 | 29918281 ~ 29937851 (-) |
| LOC110505770 | LOC100380626 | coding | upstream | 602198 | 29942119 ~ 29979525 (-) |
| G1971218 | NA | non-coding | downstream | 52353 | 29282086 ~ 29282319 (-) |
| G1971213 | NA | non-coding | downstream | 56061 | 29278388 ~ 29278611 (-) |
| G1971183 | NA | non-coding | downstream | 117505 | 29216457 ~ 29217167 (-) |
| G1971038 | NA | non-coding | downstream | 120919 | 29213540 ~ 29213753 (-) |
| G1971028 | NA | non-coding | downstream | 124226 | 29210114 ~ 29210446 (-) |
| G1971239 | tecpr2 | non-coding | upstream | 4864 | 29344785 ~ 29349969 (-) |
| G1971274 | NA | non-coding | upstream | 65059 | 29404980 ~ 29405604 (-) |
| G1971302 | NA | non-coding | upstream | 110863 | 29450784 ~ 29454913 (-) |
| G1971343 | NA | non-coding | upstream | 171324 | 29511245 ~ 29511857 (-) |
| G1971356 | NA | non-coding | upstream | 179911 | 29519832 ~ 29520387 (-) |
| G1970606 | NA | other | downstream | 472685 | 28857940 ~ 28861987 (-) |
| G1969724 | NA | other | downstream | 1190910 | 28143438 ~ 28143762 (-) |
| G1969699 | LOC100380709 | other | downstream | 1233236 | 28099921 ~ 28101436 (-) |
| LOC110505716 | LOC106024658 | other | downstream | 2569301 | 26716542 ~ 26765410 (-) |
| G1967882 | NA | other | downstream | 2795964 | 26535364 ~ 26538708 (-) |
| G1971357 | LOC106611199 | other | upstream | 182839 | 29522760 ~ 29525046 (-) |
| G1972454 | NA | other | upstream | 642363 | 29982284 ~ 29982900 (-) |
| G1972746 | npas3 | other | upstream | 1167630 | 30507551 ~ 30508058 (-) |
| G1972810 | NA | other | upstream | 1276667 | 30616588 ~ 30683403 (-) |
| G1972851 | NA | other | upstream | 1425035 | 30764956 ~ 30765933 (-) |
