znf839 (znf839)


Basic Information

Item Value
gene id znf839
gene name znf839
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 29334672 ~ 29339921 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021585174.2
GGCATATCAACGCTGGAGAAAAATATGATAGCTACAGCTAGCAGTCTCTTAGCTCACGACGTGAACTGTTTCCTTCTGTAGCGTTTAATGATTGCACCGTTTCacaatattacaacaacaaaaaaattgggACCATTGCAGTAACCTTTGTAGAAATATATTTTTACCAACGTATTGGTCTGTAAAAATTTATCGAAATTCAAGTTACCTAACCTATCGATTGGTTCAGAATTGCACATgaacatctagctagctagctacaacaatCAAAATGGCCGACAACGAGAGCAATATGTCAAGTACAACAACAGGGGCAGATCATGTTACAGTATCTCAAGTTCCATGTGTTTCTGGATTGCAAGTTAACCAGAAGCAAGTCGGCGAGAAATGCATTGAAGCAAATGCACCAGAGATCACCGAAGAGCAGGGCTTGACAGATTTCCTGCAAAGCTGCACAAAAGAGGAGACATTCGTTGCAAAGGACTCCCAGGAGGTTGTCAGCCAAACTGAAGACCATGAACAACAACCTGAACAGAACATAATAAGTTCTATTGTTGAGACCCCAGGTATTGCAACGGGAGCAGAGTATTCTACAGTCAGTGCTGACTTTGTAAATGCTCTTGCACCTGGGACCACCATCATTTATGTGCAACCAGATGGTAGTTTTGTTGAGGGATCAGGTCTGACTGAAGAGGAGCAGCAACAGCTAGTGGAGCAGTTGGCCAAACAACAGCTAATCACAGTGACTGAGAATGAGGCTGCTCATCTGTTTGAACAAAATCAAGGCATCAAAACAGTCCCTACTACTTCGTCACAGATACAGTATACTATTCCCAGTACAGCACTGGCTCCCAACGAACTGCAACAAGTGATAGAGCAAGTTACCAAATCTCAGCAATTCATGGCCCAGACACCCAAGGGATCGGAGCAGGTTGTGACCACACTGGATCCCACAACTGGCTTGTTCACAACTGTAGCAGCTTCAGAGATTGCAGTAGCAAGCCCACAGCCACTGGTCACTATGCAGAATGCATCACAGAAGCTGAAGAATGTTGCGAAACAAGTGGCACTTCAGTCCCACAATGGTACACGCCTGGTTCAGAAAAAGCAGGAAACCATCAGAATCCAAGTCCAGATACCATCTGGAAAGCAGGAGGGGAAAGGACCTACACAGACTACCATATCAATCCCTCAACAGAAGAACTTGGCTGTGGCCAGTCAAGGCCAGCAAGTCAAAGTGTCTACGAACGGCAGTGTGAGCAACAGCCCCCAGATCATCCACATCACACCCATAGTTGGACAGCAACAGTACTTCCTACAGCAGAACCCTGGAAACCCTCCTATTCAGCTGCTACTGCAGAGCTCAACACCTGTGGTTGGGAGCCTGGTTCCCGTTGTGCACAAACTGCCAATACCTGTTCAGACCCCTGTCCAGCAGCCTTCAGGTAAGGCCCCGGTCAATGGCACAACAGTCACAGCAATTAAACCTGCcacgtctgtctctgtccccacagtggaaaaagtcaaaagggTCAAAACCAGAATGAAAAAGGCACCGAAAATCAAAACGCGTTCCGGGAGGGTGTCCAGACCGCCCAAGTACAAGGTGAAGGACTATAAGTTCATCAAGACAGAGGACTTGGCCGAGAGCCATCAGTCAGATTCTGACGACTACTCTGAAATCAGTGTGGAGGAAGATGAAGATGGTGAGGATGGTAAAAAGGGAGCAGCATCTATGATTTACAGTCACAAGCGGAAGGCCTTTCAATGTGAAACGTGCGATAAAGCTTACATAGGCCATGGAGGTCTGTCCAGACACTACAGGCTGAACCCCTCCCACGGTGAACTGAAGTCACTTCCTGAAGGGACCTCTAAAACAGACAGCCCTGATAAAAGCACAGACGCTGGGGCCGAACATAAGAAGCCGACTGAAGAAAGTAATGCAAGCAGTGTTAAAAATACATCAGGTCCTGAGAAAAGTGAGGCCACAGAGAAAGCTGCTGCAATGTCAACCACTCAACAAAAAGCGGATACATCAGCAACCCAAGGAGTAGCAGCTTCTACCAGGCAGGCTGTGGTCCAGGCTCGGGGACCAGGGAGGCCCAGAGGACGAGGCAGACCACCTACCAAAGCACACCCAGCGGTGAGACTGGGGCGACCTCCAAAGCTAGGAGGGGGAGCAGCCAGCGTGGAGCAGCAGACCCAGAGTAGGAAAGCATGGCTCAAAGAGGTGACACACGAATGTGACAATGAAGAACTAATGGAGACTGTGCTCCCTCGTCTGGCTAAGGTCATGACTGTCTGGGAGTTCCTCCTGATGAAGGTGGAGAAGGGGCGGCAACCCAAAACCCAGTTTTCGGATGTGTACCGGGagtttgagaagctccacagtcaGGTGAAGAAGATGGCCCAAGACTACATCAGTAACCCTCAGGGTGTCCACATGGCCTTGGAGGTCCACAATGTAGAGGTTGCCAAATCTCTTGGCATCTTCGATGAGGTGAACAAATTCAAAGTTCTGAACCCTCCAACTCAGCAGAATGTCACCAACATGGCAACCAAGAATGTCCACTATATGGAGAATTCTAAAATGTTACCTCCAACAAAGAGGTTTAAAATGGAAAACCAGGCTGGTGTTCAGATCCATCAGAACGGCATTGAGACTTCCACAAAAGAATCTAGTGAGGCCAAAGTCGAGAACACCGCAACAACAAGCATGAAGTACATTTCGCCACATACTGAGGTTGTCACCAAGAGTCCCGTGGGCCCTCAAGTCACTCAGACTGCTACCATCACACCACAGGTCGTCTCATCTAACCCTGAGACGAACATAACACCCATGGAACTGATCCAGGATCACTTATCCAACAGCATGACAGAGACCGTTGACTCAGTAGGAGAGGAGGCCATGGAGACAGATCAGGGTGTGTCTGGTACAGAACCtactgaggtcctgagcaccaGTGACATAGCTGATCAAATGAAGGAGCTAGAGAAGGCCTTGGCCACAGACCCAGTCGCAGTTGATCAGCAGCCCATGAGTACTCAGCCGCAGCAGTCCAACCCTACCCCAGTCCAGCAGAGTGGCCTAACCCAGGCTGCCTCCACCTCCAGTGGACTAGGCCAGGTGGTGGTTCAGGAGGCCCAGGGCTGCCAGGAGGTCCAGGAGATCTACATCCAGACGGAGGGGCTGACCATGCACCTAGCAGACGGCCAGGTAGGCGAATTGGCCTCGGAGCGCATCGTCATCGTCAACGGGCCTGATGGCACCACTATGCACATCCGCGCCCCTGAAGGAGTCCCTCTGGAAGCAGTCCACGCTCTGCTTGGTATTGAGGCTGAGGGGAAAACACAGCAGTGATGATTTTTGTTCCTCCACACCCGGCCACCTCAACACCAAGCACACATCTCTCTTTTCCATCTGGTGGATTTTAAGTGTATTCCTGGTATTCTTTGTAAATTTGTAAACGTTCTTTTCGTTGTGGTGTTTTCATCCTTTAACAAGTGCTTAGTTTGTGATATGTTTATATGTAGATAAATATCAAAGCAGTACAAAAAATGTTGCACTATTTTATTACTTTTTATATATTTGGGTGTAACATTTTCAAAAAATAGGTTTCTAATACCATTGAAAATGAATGCAAATGAGGGGAAATAAAATCAAAAGTTAAGAAATTGTGGTTATTCATTTCCATGTTTCATTTGTGACTCATTGTTGCAATACAACCATTTCATATGCTGTACAGTTGAACTCATTTTCCTAATAAAGGATGCGAGAACCAAATCA
>XM_021585175.2
GGCATATCAACGCTGGAGAAAAATATGATAGCTACAGCTAGCAGTCTCTTAGCTCACGACGTGAACTGTTTCCTTCTGTAGCGTTTAATGATTGCACCGTTTCacaatattacaacaacaaaaaaattgggACCATTGCAGTAACCTTTGTAGAAATATATTTTTACCAACGTATTGGTCTGTAAAAATTTATCGAAATTCAAGTTACCTAACCTATCGATTGGTTCAGAATTGCACATgaacatctagctagctagctacaacaatCAAAATGGCCGACAACGAGAGCAATATGTCAAGTACAACAACAGGGGCAGATCATGTTACAGTATCTCAAGTTCCATGTGTTTCTGGATTGCAAGTTAACCAGAAGCAAGTCGGCGAGAAATGCATTGAAGCAAATGCACCAGAGATCACCGAAGAGCAGGGCTTGACAGATTTCCTGCAAAGCTGCACAAAAGAGGAGACATTCGTTGCAAAGGACTCCCAGGAGGTTGTCAGCCAAACTGAAGACCATGAACAACAACCTGAACAGAACATAATAAGTTCTATTGTTGAGACCCCAGGTATTGCAACGGGAGCAGAGTATTCTACAGTCAGTGCTGACTTTGTAAATGCTCTTGCACCTGGGACCACCATCATTTATGTGCAACCAGATGGTAGTTTTGTTGAGGGATCAGGTCTGACTGAAGAGGAGCAGCAACAGCTAGTGGAGCAGTTGGCCAAACAACAGCTAATCACAGTGACTGAGAATGAGGCTGCTCATCTGTTTGAACAAAATCAAGGCATCAAAACAGTCCCTACTACTTCGTCACAGATACAGTATACTATTCCCAGTACAGCACTGGCTCCCAACGAACTGCAACAAGTGATAGAGCAAGTTACCAAATCTCAGCAATTCATGGCCCAGACACCCAAGGGATCGGAGCAGGTTGTGACCACACTGGATCCCACAACTGGCTTGTTCACAACTGTAGCAGCTTCAGAGATTGCAGTAGCAAGCCCACAGCCACTGGTCACTATGCAGAATGCATCACAGAAGCTGAAGAATGTTGCGAAACAAGTGGCACTTCAGTCCCACAATGGTACACGCCTGGTTCAGAAAAAGGAAACCATCAGAATCCAAGTCCAGATACCATCTGGAAAGCAGGAGGGGAAAGGACCTACACAGACTACCATATCAATCCCTCAACAGAAGAACTTGGCTGTGGCCAGTCAAGGCCAGCAAGTCAAAGTGTCTACGAACGGCAGTGTGAGCAACAGCCCCCAGATCATCCACATCACACCCATAGTTGGACAGCAACAGTACTTCCTACAGCAGAACCCTGGAAACCCTCCTATTCAGCTGCTACTGCAGAGCTCAACACCTGTGGTTGGGAGCCTGGTTCCCGTTGTGCACAAACTGCCAATACCTGTTCAGACCCCTGTCCAGCAGCCTTCAGGTAAGGCCCCGGTCAATGGCACAACAGTCACAGCAATTAAACCTGCcacgtctgtctctgtccccacagtggaaaaagtcaaaagggTCAAAACCAGAATGAAAAAGGCACCGAAAATCAAAACGCGTTCCGGGAGGGTGTCCAGACCGCCCAAGTACAAGGTGAAGGACTATAAGTTCATCAAGACAGAGGACTTGGCCGAGAGCCATCAGTCAGATTCTGACGACTACTCTGAAATCAGTGTGGAGGAAGATGAAGATGGTGAGGATGGTAAAAAGGGAGCAGCATCTATGATTTACAGTCACAAGCGGAAGGCCTTTCAATGTGAAACGTGCGATAAAGCTTACATAGGCCATGGAGGTCTGTCCAGACACTACAGGCTGAACCCCTCCCACGGTGAACTGAAGTCACTTCCTGAAGGGACCTCTAAAACAGACAGCCCTGATAAAAGCACAGACGCTGGGGCCGAACATAAGAAGCCGACTGAAGAAAGTAATGCAAGCAGTGTTAAAAATACATCAGGTCCTGAGAAAAGTGAGGCCACAGAGAAAGCTGCTGCAATGTCAACCACTCAACAAAAAGCGGATACATCAGCAACCCAAGGAGTAGCAGCTTCTACCAGGCAGGCTGTGGTCCAGGCTCGGGGACCAGGGAGGCCCAGAGGACGAGGCAGACCACCTACCAAAGCACACCCAGCGGTGAGACTGGGGCGACCTCCAAAGCTAGGAGGGGGAGCAGCCAGCGTGGAGCAGCAGACCCAGAGTAGGAAAGCATGGCTCAAAGAGGTGACACACGAATGTGACAATGAAGAACTAATGGAGACTGTGCTCCCTCGTCTGGCTAAGGTCATGACTGTCTGGGAGTTCCTCCTGATGAAGGTGGAGAAGGGGCGGCAACCCAAAACCCAGTTTTCGGATGTGTACCGGGagtttgagaagctccacagtcaGGTGAAGAAGATGGCCCAAGACTACATCAGTAACCCTCAGGGTGTCCACATGGCCTTGGAGGTCCACAATGTAGAGGTTGCCAAATCTCTTGGCATCTTCGATGAGGTGAACAAATTCAAAGTTCTGAACCCTCCAACTCAGCAGAATGTCACCAACATGGCAACCAAGAATGTCCACTATATGGAGAATTCTAAAATGTTACCTCCAACAAAGAGGTTTAAAATGGAAAACCAGGCTGGTGTTCAGATCCATCAGAACGGCATTGAGACTTCCACAAAAGAATCTAGTGAGGCCAAAGTCGAGAACACCGCAACAACAAGCATGAAGTACATTTCGCCACATACTGAGGTTGTCACCAAGAGTCCCGTGGGCCCTCAAGTCACTCAGACTGCTACCATCACACCACAGGTCGTCTCATCTAACCCTGAGACGAACATAACACCCATGGAACTGATCCAGGATCACTTATCCAACAGCATGACAGAGACCGTTGACTCAGTAGGAGAGGAGGCCATGGAGACAGATCAGGGTGTGTCTGGTACAGAACCtactgaggtcctgagcaccaGTGACATAGCTGATCAAATGAAGGAGCTAGAGAAGGCCTTGGCCACAGACCCAGTCGCAGTTGATCAGCAGCCCATGAGTACTCAGCCGCAGCAGTCCAACCCTACCCCAGTCCAGCAGAGTGGCCTAACCCAGGCTGCCTCCACCTCCAGTGGACTAGGCCAGGTGGTGGTTCAGGAGGCCCAGGGCTGCCAGGAGGTCCAGGAGATCTACATCCAGACGGAGGGGCTGACCATGCACCTAGCAGACGGCCAGGTAGGCGAATTGGCCTCGGAGCGCATCGTCATCGTCAACGGGCCTGATGGCACCACTATGCACATCCGCGCCCCTGAAGGAGTCCCTCTGGAAGCAGTCCACGCTCTGCTTGGTATTGAGGCTGAGGGGAAAACACAGCAGTGATGATTTTTGTTCCTCCACACCCGGCCACCTCAACACCAAGCACACATCTCTCTTTTCCATCTGGTGGATTTTAAGTGTATTCCTGGTATTCTTTGTAAATTTGTAAACGTTCTTTTCGTTGTGGTGTTTTCATCCTTTAACAAGTGCTTAGTTTGTGATATGTTTATATGTAGATAAATATCAAAGCAGTACAAAAAATGTTGCACTATTTTATTACTTTTTATATATTTGGGTGTAACATTTTCAAAAAATAGGTTTCTAATACCATTGAAAATGAATGCAAATGAGGGGAAATAAAATCAAAAGTTAAGAAATTGTGGTTATTCATTTCCATGTTTCATTTGTGACTCATTGTTGCAATACAACCATTTCATATGCTGTACAGTTGAACTCATTTTCCTAATAAAGGATGCGAGAACCAAATCA

Function

symbol description
znf839 Predicted to enable metal ion binding activity. Orthologous to human ZNF839 (zinc finger protein 839).

NR:

description
uncharacterized protein LOC110505754 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021585174.2 False 3787 mRNA 0.48 8 29334672 29339921
XM_021585175.2 True 3784 mRNA 0.48 8 29334672 29339921

Neighbor

gene id symbol gene type direction distance location
si:ch211-266o15.1 LOC106611192 coding downstream 13664 29290704 ~ 29321008 (-)
ptp4a2a LOC106611191 coding downstream 63792 29267052 ~ 29270880 (-)
LOC110505749 NA coding downstream 67797 29220723 ~ 29266875 (-)
LOC110504220 LOC106601062 coding downstream 112940 29217381 ~ 29221732 (-)
daam1a daam1 coding downstream 128450 29135361 ~ 29206222 (-)
LOC110505761 ankrd9 coding upstream 38358 29378279 ~ 29380539 (-)
LOC110505765 LOC106611200 coding upstream 376681 29716602 ~ 29766891 (-)
LOC118944366 NA coding upstream 498353 29838274 ~ 29857889 (-)
LOC110505769 LOC106611207 coding upstream 578360 29918281 ~ 29937851 (-)
LOC110505770 LOC100380626 coding upstream 602198 29942119 ~ 29979525 (-)
G1971218 NA non-coding downstream 52353 29282086 ~ 29282319 (-)
G1971213 NA non-coding downstream 56061 29278388 ~ 29278611 (-)
G1971183 NA non-coding downstream 117505 29216457 ~ 29217167 (-)
G1971038 NA non-coding downstream 120919 29213540 ~ 29213753 (-)
G1971028 NA non-coding downstream 124226 29210114 ~ 29210446 (-)
G1971239 tecpr2 non-coding upstream 4864 29344785 ~ 29349969 (-)
G1971274 NA non-coding upstream 65059 29404980 ~ 29405604 (-)
G1971302 NA non-coding upstream 110863 29450784 ~ 29454913 (-)
G1971343 NA non-coding upstream 171324 29511245 ~ 29511857 (-)
G1971356 NA non-coding upstream 179911 29519832 ~ 29520387 (-)
G1970606 NA other downstream 472685 28857940 ~ 28861987 (-)
G1969724 NA other downstream 1190910 28143438 ~ 28143762 (-)
G1969699 LOC100380709 other downstream 1233236 28099921 ~ 28101436 (-)
LOC110505716 LOC106024658 other downstream 2569301 26716542 ~ 26765410 (-)
G1967882 NA other downstream 2795964 26535364 ~ 26538708 (-)
G1971357 LOC106611199 other upstream 182839 29522760 ~ 29525046 (-)
G1972454 NA other upstream 642363 29982284 ~ 29982900 (-)
G1972746 npas3 other upstream 1167630 30507551 ~ 30508058 (-)
G1972810 NA other upstream 1276667 30616588 ~ 30683403 (-)
G1972851 NA other upstream 1425035 30764956 ~ 30765933 (-)

Expression


Co-expression Network