LOC110505761 (ankrd9)


Basic Information

Item Value
gene id LOC110505761
gene name ankrd9
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 29378279 ~ 29380539 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021585189.2
ATTAGCTTATTCAGAACCAATTTTACACTGATTTCCCACTTCATAACCCATTTTAAATTGCATTTACACTTCTGCATGACTCATAATAAATAATGTCAACAGGTCAGATTTGATCATACCATGATGTGTGGACATATTGTAAGCTGTATGTTTTCAAATGAATTTAAATGGGTGATGAGGGTGAAGATGATGAAGATGTGCATATGCTACTTTGTCAATTCAAGGTTATTTATGACATGTAATTACACGTAGTCAGCAGGCAGATGGCGTGGTGGACTATCGAAAATACGCCTATAATTGTCTTTCCTAAACTGAAGCTGCTAAAACTAATACGTTATATAACACATACATTTGACTTTTGCACGAACCTACAAGCTGTTACACAATTTGAGGTTAACTTGAATGTCAACGTTTAAAAAACACTTTCAAATACCTATATTGTTGCCTGTCGAGACCTGTAGTCCATGTTATTGATGTGGTATATCTTGTTTAATAGGTCTAAAGTCGATAGGTGTAACCTAATCCTGACGACACAACACGATCTGAACAAGATGTAAATTCCTTGAAATTATGAAACCCGAGGTGGCGCGTTGCACCAGACGCTCAATTACATAATGCACTGCCGAACCACAACCGGACGGTTCTGTTTGCACTGGGGACATTCGATAGGGGCGATAGCGCGTTGCCCAAACAAATCGCTCACATGGCGCACTAAACACATACTTTAAAGTTAACGGCACTTGGAATTTAGGACGTCACATTTAATCTCACCTTGGAGTCGTCATCAGACAGCCAATGGGGATATTTGTTGACGCAGTGAGCGACCAACGAGGGCAGTCGTGAAGGAGTTCCACTATTGCCTATTGCAAGGGTATATAAACTGCCGATGGAGTCTGAAGAAGGTTTGAAGCAAGTCAATAACAGCCGAAACATACTGAACGCAGACTCCAAGAGCAGCGAGACAGAAGAGCCGTTACGTTTGCTATGGGCTTTCATTTTTATTTGAAAAACTTTTTGCCGTGTGTTATGCAAGTTCCCTAAATTCAGCTAttgattattttatatatttataactGTTTTCTTCTAAATCACATCTGACATCCTGTGTTGATGTTAACAGAGCTGGCACAGAGGTGCTAGGCTATACCTTGCAAAAAAAGGTATATTCAGAAATTAAAGGAATCTGCCGAACACAGTAGCAATGCCTTACGATCTAGGTGTGTTTGACAGCCGGGCCGATTATAAATCAGAGAAACAGTGCCAAAGAACCTCCTTTGCCTTCTACCAAGCAGTGCGGGACCTGTTACCAGTATGGGTGCTCGAGGACATGCGGACTATGGAAGTGTTTCATTGGGAAGAAGGGCGGGCATGCTCTTTTACTCCACCCGAGGCTTTTCTGTATGCACTTGTTCACGACCATCAACAATACGCCAAATTCCTCCTCAACAGATACTCTGTTGGTGCACTGGAGATGCCCAGTCAAAGCTTCTGCTGCTGCCAAGCATCAGCAACACCGCATCTCACAGTTGCTGTTCGCTATAATCGTATTACTATCCTGAAAATGATCATGGACTCCCTAAAAGACTTCTCTGATAGTGAGCGCCAGAGCTACTTGAACACCCGTGGATGTTTTCACATGCAAGGAGGCAAAGACGTATTGCATCTGGCGTGCGAACTGGTGCGCCCTGAGTGTTTGATTATGTTACTAGGACACGGTGCATGTCCTTATGTCACAGACCGAGATGGGAACACCCCCTTGGACTGCCTCCTAAATCAGATACGTCAGGGCGAGCCTGACATGCGTAGCAAGCACGTCTGCCTTGGTTACCTCATTCTCTTCATGCCAAAATTCAATTTTCAAATGAAGGGACAGTTGCAGAAGAATCCAGGGCTGTGGCAGAGTCTTATTGGAGAGCAGGCGCTCCAGTGGCTCTTAGaactatctcctccctctctctttgttcaGGCTATGCATAAGATGACCCAGTCTAAACCTGTTAAACAGTTGGACTCTCTGCCAGACTTTCTGAAACCACTGGACTTCAGGCTACACCAGTATACCAGATGAAACTACTCGACAGGTTTATTTTTGGCTATGGTGTGAACGATTTAATAGTGTGAATAAAATGCAGTATGCAGCTTTGTAAATAGGAACAACAACTCAAAAGGTTATTTCATTTTGATGTTTAAAAACAATGCACTATAGAATACACATCTGGACTTGAATAATGTTGCAATGTAAATAAGAGTTGTGTACGAGA

Function

symbol description
ankrd9 Orthologous to human ANKRD9 (ankyrin repeat domain 9).

NR:

description
ankyrin repeat domain-containing protein 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021585189.2 True 2261 mRNA 0.42 1 29378279 29380539

Neighbor

gene id symbol gene type direction distance location
znf839 znf839 coding downstream 38358 29334672 ~ 29339921 (-)
si:ch211-266o15.1 LOC106611192 coding downstream 57271 29290704 ~ 29321008 (-)
ptp4a2a LOC106611191 coding downstream 107399 29267052 ~ 29270880 (-)
LOC110505749 NA coding downstream 111404 29220723 ~ 29266875 (-)
LOC110504220 LOC106601062 coding downstream 156547 29217381 ~ 29221732 (-)
LOC110505765 LOC106611200 coding upstream 336063 29716602 ~ 29766891 (-)
LOC118944366 NA coding upstream 457735 29838274 ~ 29857889 (-)
LOC110505769 LOC106611207 coding upstream 537742 29918281 ~ 29937851 (-)
LOC110505770 LOC100380626 coding upstream 561580 29942119 ~ 29979525 (-)
LOC110504221 NA coding upstream 613218 29993757 ~ 29996679 (-)
G1971239 tecpr2 non-coding downstream 28310 29344785 ~ 29349969 (-)
G1971218 NA non-coding downstream 95960 29282086 ~ 29282319 (-)
G1971213 NA non-coding downstream 99668 29278388 ~ 29278611 (-)
G1971183 NA non-coding downstream 161112 29216457 ~ 29217167 (-)
G1971038 NA non-coding downstream 164526 29213540 ~ 29213753 (-)
G1971274 NA non-coding upstream 24441 29404980 ~ 29405604 (-)
G1971302 NA non-coding upstream 70245 29450784 ~ 29454913 (-)
G1971343 NA non-coding upstream 130706 29511245 ~ 29511857 (-)
G1971356 NA non-coding upstream 139293 29519832 ~ 29520387 (-)
G1971360 NA non-coding upstream 146265 29526804 ~ 29527109 (-)
G1970606 NA other downstream 516292 28857940 ~ 28861987 (-)
G1969724 NA other downstream 1234517 28143438 ~ 28143762 (-)
G1969699 LOC100380709 other downstream 1276843 28099921 ~ 28101436 (-)
LOC110505716 LOC106024658 other downstream 2612908 26716542 ~ 26765410 (-)
G1967882 NA other downstream 2839571 26535364 ~ 26538708 (-)
G1971357 LOC106611199 other upstream 142221 29522760 ~ 29525046 (-)
G1972454 NA other upstream 601745 29982284 ~ 29982900 (-)
G1972746 npas3 other upstream 1127012 30507551 ~ 30508058 (-)
G1972810 NA other upstream 1236049 30616588 ~ 30683403 (-)
G1972851 NA other upstream 1384417 30764956 ~ 30765933 (-)

Expression


Co-expression Network