LOC110505780 (eapp)


Basic Information

Item Value
gene id LOC110505780
gene name eapp
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 30880634 ~ 30891858 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021585214.2
GTCCGCTACTTCAACAATTTCGTTTCTACTGATGAATCTCACTATCTCACACACCAAACTTTAACTTTGAAAAGCGCAAACCGGAAGTAATCAAGAAGTTAGCTACAAGATTCTGGCGTGCGTCTCAAAAAGTTTCCTCTGTTTATCTTTAGCTACCTCTTTAACCGTTTTCGTTGGTTAGATTGTTAGAATTCTCAAAATACCAAATGAACAGACACGTAGAGGATGATTCATATGAGATAGAGGAGCCAAGTGATGAAGAAAGAGCTGAAGACAGGTTACATGTTTTGGCCTCTGAGGATGAGCTGGAAGTGCTCTTGAACGGGACCCCGGATCAGAAGAAGAAACTCATCCGAGAATACCTCACTGGGGAGAGTGAGTCCTCCAGTGGGGATGAGtttgagaaagagatggaggcaGAGCTCTGCACCACCATTAAAACTATGGAGTGCAAATGGTTGCCCCTTACAGCATCAGCAGGGGAGACTTCGGGTACCAGTGATAATGCTTCAACACCTGGGTTGCCAGAGCTTTATGACAATGTTTATTTTGACTCCGattcagaagaggaggaaacggCTCCAAGTAGTTCGTTGGGTAAGAGATGCAGGAAACAGCGATCCATCCCCACCAACGATGAACTACTGTACGACCCTGATGAGGATGACCGGGATCAGGCATGGGTGGACACCAAGAGGAAGAGGTACAATGAAAAGAGAAGATTGCCATCTTCACAGAACAGAAGAGGGCAGTCCCAGGGGCTTCCAAGCAGCGATGCTGTCCTTAACTGCCCAGCATGCATGACCATGCTGTGCCTCGACTGCCAAAGGCATCACAAATACAGGACCCAATACAGAGCCATGTTTGTCATGAACTGcacagtaaacaaagaggagaTTTTACGGTACAAAACACTCAACGAGAACAATCTGAGGAACAGAAAGAGGAAAGGGCGTCAACCAGAGCCAACAACGGCAATTGAAGCCACAGATTCAGGAGTGGTGGTGGGTGGAGAGATCTACCATCCTGTCCAGTGCACAGAGTGCTCCACTGAGGTGGCAGTGCTCGATAAGGACGAGGTCTACCACTTTTTTAACATCCTCGCCAGCCACTGCTAAAATGACTGTTGCTGTGACCTTTGATATCTCTGTTAAAACATTTGTTACCTGAATGTACATGGCAACATATTTTTGTGTTATAATTGCCTGAAGGCACATGCCAACATATTTTTCTGTTATAAGACCGGTGTGTATTTTGTAAAGGTATGCTGTACAGCCACGGTCTTCCAACGTTATATTAAGTTTACCCCTATGgtatttattgtatttttcttgatatttttttgtgtgtgtgtgcaacaaaTCTACTTATTTTGTTTTTCTGAAGTTGGACCTGGCTACCATAGATATTTGGTCATTAGTACAtatcaaaataaaatgtttttaatatTTTG
>XM_021585216.2
ATTGAAAACTGTCCGCTACTTCAACAATTTCGTTTCTACTGATGAATCTCACTATCTCACACACCAAACTTTAACTTTGAAAAGCGCAAACCGGAAGTAATCAAGAAGTTAGCTACAAGATTCTGGCGTGCGTCTCAAAAAGTTTCCTCTGTTTATCTTTAGCTACCTCTTTAACCGTTTTCGTTGGTTAGATTGTTAGAATTCTCAAAATACCAAATGAACAGACACGTAGAGGATGATTCATATGAGATAGAGGAGCCAAGTGATGAAGAAAGAGCTGAAGACAGGTTACATGTTTTGGCGTAAGCATTTGGCTAGATGGCTAGGAGACTTAACGTAAGCTGCTCTGAGGATGAGCTGGAAGTGCTCTTGAACGGGACCCCGGATCAGAAGAAGAAACTCATCCGAGAATACCTCACTGGGGAGAGTGAGTCCTCCAGTGGGGATGAGtttgagaaagagatggaggcaGAGCTCTGCACCACCATTAAAACTATGGAGTGCAAATGGTTGCCCCTTACAGCATCAGCAGGGGAGACTTCGGGTACCAGTGATAATGCTTCAACACCTGGGTTGCCAGAGCTTTATGACAATGTTTATTTTGACTCCGattcagaagaggaggaaacggCTCCAAGTAGTTCGTTGGGTAAGAGATGCAGGAAACAGCGATCCATCCCCACCAACGATGAACTACTGTACGACCCTGATGAGGATGACCGGGATCAGGCATGGGTGGACACCAAGAGGAAGAGGTACAATGAAAAGAGAAGATTGCCATCTTCACAGAACAGAAGAGGGCAGTCCCAGGGGCTTCCAAGCAGCGATGCTGTCCTTAACTGCCCAGCATGCATGACCATGCTGTGCCTCGACTGCCAAAGGCATCACAAATACAGGACCCAATACAGAGCCATGTTTGTCATGAACTGcacagtaaacaaagaggagaTTTTACGGTACAAAACACTCAACGAGAACAATCTGAGGAACAGAAAGAGGAAAGGGCGTCAACCAGAGCCAACAACGGCAATTGAAGCCACAGATTCAGGAGTGGTGGTGGGTGGAGAGATCTACCATCCTGTCCAGTGCACAGAGTGCTCCACTGAGGTGGCAGTGCTCGATAAGGACGAGGTCTACCACTTTTTTAACATCCTCGCCAGCCACTGCTAAAATGACTGTTGCTGTGACCTTTGATATCTCTGTTAAAACATTTGTTACCTGAATGTACATGGCAACATATTTTTGTGTTATAATTGCCTGAAGGCACATGCCAACATATTTTTCTGTTATAAGACCGGTGTGTATTTTGTAAAGGTATGCTGTACAGCCACGGTCTTCCAACGTTATATTAAGTTTACCCCTATGgtatttattgtatttttcttgatatttttttgtgtgtgtgtgcaacaaaTCTACTTATTTTGTTTTTCTGAAGTTGGACCTGGCTACCATAGATATTTGGTCATTAGTACAtatcaaaataaaatgtttttaatatTTTG
>XM_021585215.2
ATTAATTGAAAACTGTCCGCTACTTCAACAATTTCGTTTCTACTGATGAATCTCACTATCTCACACACCAAACTTTAACTTTGAAAAGCGCAAACCGGAAGTAATCAAGAAGTTAGCTACAAGATTCTGGCGTGCGTCTCAAAAAGTTTCCTCTGTTTATCTTTAGCTACCTCTTTAACCGTTTTCGTTGGTTAGATTGTTAGAATTCTCAAAATACCAAATGAACAGACACGTAGAGGATGATTCATATGAGATAGAGGAGCCAAGTGATGAAGAAAGAGCTGAAGACAGGTTACATGTTTTGGCGTAAGCATTTGGCTAGATGGCTAGGAGACTTAACCTCTGAGGATGAGCTGGAAGTGCTCTTGAACGGGACCCCGGATCAGAAGAAGAAACTCATCCGAGAATACCTCACTGGGGAGAGTGAGTCCTCCAGTGGGGATGAGtttgagaaagagatggaggcaGAGCTCTGCACCACCATTAAAACTATGGAGTGCAAATGGTTGCCCCTTACAGCATCAGCAGGGGAGACTTCGGGTACCAGTGATAATGCTTCAACACCTGGGTTGCCAGAGCTTTATGACAATGTTTATTTTGACTCCGattcagaagaggaggaaacggCTCCAAGTAGTTCGTTGGGTAAGAGATGCAGGAAACAGCGATCCATCCCCACCAACGATGAACTACTGTACGACCCTGATGAGGATGACCGGGATCAGGCATGGGTGGACACCAAGAGGAAGAGGTACAATGAAAAGAGAAGATTGCCATCTTCACAGAACAGAAGAGGGCAGTCCCAGGGGCTTCCAAGCAGCGATGCTGTCCTTAACTGCCCAGCATGCATGACCATGCTGTGCCTCGACTGCCAAAGGCATCACAAATACAGGACCCAATACAGAGCCATGTTTGTCATGAACTGcacagtaaacaaagaggagaTTTTACGGTACAAAACACTCAACGAGAACAATCTGAGGAACAGAAAGAGGAAAGGGCGTCAACCAGAGCCAACAACGGCAATTGAAGCCACAGATTCAGGAGTGGTGGTGGGTGGAGAGATCTACCATCCTGTCCAGTGCACAGAGTGCTCCACTGAGGTGGCAGTGCTCGATAAGGACGAGGTCTACCACTTTTTTAACATCCTCGCCAGCCACTGCTAAAATGACTGTTGCTGTGACCTTTGATATCTCTGTTAAAACATTTGTTACCTGAATGTACATGGCAACATATTTTTGTGTTATAATTGCCTGAAGGCACATGCCAACATATTTTTCTGTTATAAGACCGGTGTGTATTTTGTAAAGGTATGCTGTACAGCCACGGTCTTCCAACGTTATATTAAGTTTACCCCTATGgtatttattgtatttttcttgatatttttttgtgtgtgtgtgcaacaaaTCTACTTATTTTGTTTTTCTGAAGTTGGACCTGGCTACCATAGATATTTGGTCATTAGTACAtatcaaaataaaatgtttttaatatTTTG

Function

symbol description
eapp Predicted to be involved in positive regulation of cell population proliferation. Predicted to be active in nucleus. Orthologous to human EAPP (E2F associated phosphoprotein).

NR:

description
E2F-associated phosphoprotein-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021585214.2 False 1453 mRNA 0.44 6 30880634 30891844
XM_021585216.2 False 1505 mRNA 0.44 6 30880634 30891854
XM_021585215.2 True 1501 mRNA 0.43 6 30880634 30891858

Neighbor

gene id symbol gene type direction distance location
sptssa NA coding downstream 481 30875080 ~ 30880165 (-)
LOC110505778 LOC106611226 coding downstream 8611 30857050 ~ 30872023 (-)
LOC110504221 NA coding downstream 883955 29993757 ~ 29996679 (-)
LOC110505770 LOC100380626 coding downstream 901109 29942119 ~ 29979525 (-)
LOC110505769 LOC106611207 coding downstream 942783 29918281 ~ 29937851 (-)
LOC110505779 snx6 coding upstream 132 30891990 ~ 30899754 (-)
LOC110505781 cf12 coding upstream 17117 30908975 ~ 30912793 (-)
LOC110505782 LOC106611229 coding upstream 21184 30913042 ~ 30985764 (-)
LOC110505783 LOC106611230 coding upstream 94907 30986765 ~ 30992089 (-)
LOC110505787 LOC106611255 coding upstream 195502 31087360 ~ 31089298 (-)
G1972872 LOC106562530 non-coding downstream 69926 30810371 ~ 30810708 (-)
G1972869 NA non-coding downstream 74979 30805415 ~ 30805655 (-)
G1972868 NA non-coding downstream 75295 30804944 ~ 30805339 (-)
G1972863 NA non-coding downstream 84071 30795604 ~ 30796563 (-)
G1972932 NA non-coding upstream 75900 30967758 ~ 30968041 (-)
G1972937 NA non-coding upstream 104907 30996765 ~ 31028122 (-)
G1972967 NA non-coding upstream 150505 31042363 ~ 31042565 (-)
G1972973 NA non-coding upstream 153713 31045571 ~ 31045859 (-)
G1972999 NA non-coding upstream 172636 31064494 ~ 31064783 (-)
G1972851 NA other downstream 114701 30764956 ~ 30765933 (-)
G1972810 NA other downstream 197231 30616588 ~ 30683403 (-)
G1972746 npas3 other downstream 372576 30507551 ~ 30508058 (-)
G1972454 NA other downstream 897734 29982284 ~ 29982900 (-)
G1971357 LOC106611199 other downstream 1355588 29522760 ~ 29525046 (-)
G1973793 NA other upstream 692682 31584540 ~ 31585046 (-)
G1973835 LOC106611243 other upstream 722563 31614421 ~ 31618499 (-)
G1974000 NA other upstream 1094585 31986443 ~ 31986884 (-)
G1975453 NA other upstream 2427871 33319729 ~ 33324325 (-)
G1975763 NA other upstream 2664572 33556430 ~ 33556811 (-)

Expression


Co-expression Network