LOC110505795 (LOC106611242)


Basic Information

Item Value
gene id LOC110505795
gene name LOC106611242
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31446911 ~ 31459466 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021585234.2
GCTACCACGGAGAAAGTAGATGGGTCTCCAAAGAGAGAGGTGGTCCAACGCTACTCACCACTGTCATCAGAACAGCGCGAGCTGCTTGCCAGAGAAGCATCTACACACTGCGTACTCGACATTACATTGAATCTTTCAGGTTTTGATCATGCAGCTTTTTCTGATTTGTGCAAACTGAAAAGCACTTAGATTTATCCGTTTATCTTGGAGACCACGACGGTGTTTGAATATCAAACGGACCAGTTTTACGCACGCAATTGGTGCCCAGTGTATACAGGTTGTTGGGATAGCCGCTCCAACAGACAAAAGTTATGGACAAGTCATTTAGTGGTCTGGAAGATTAGACCATGATATGTGCGTCTGCACATCAACGTTTTTGATGCGCGTCATGATTTTCTAGGCTCTTCACAGTGATTGTATGTGGCCCGCTGTTGCCAGTTACATGTTGTAAATCGTCGCTTCTTGGATATGGATACAATGAAAGAAACGGCTGCTGTTGCAGAGATGCTGGCCTCTAAGGATTGCACATTACAGTTTCGGGAAAGGAGACCATTCGATAAGCGCTCCAGGGAAAGAATAGAGGCAGAGATGGATCGGGTGCGAACTCGGGAGAGATTTGAAGCCACTCTAGCCGGTCTCGGAGAGCTGGAATACTTGAGACAGCGACAGGAATTACTGGTCAGAAATGTGTTGAATCACCAGGAGTACTCTATACCAACAGTAGATCTAATGTGCGTTACGCACGAGGGGAATTACTTGAACTCGGAGGAAAAACTTCTAGAAGAAAATATTTTATTGCTAAGAAAACAACTGAACTGCCTGAGAAGGAGAGATGCTGGTTTGATCAATCAGCTGCAGGAGTTGGACAGGCAGATCAGTGACCTCCGGTTGGACACGGAGGTGTCACGTGAACACGTGGAGACAGACAGCCGCCCGAGCTCAGgcTTTTACGAGCTGAGCGACGGCGCTTCAGGGTCTCTCTCCAACTCTTCCAACTCGGTGTTCAGCGAGTGTTTGTCCAACTGTCGCTCCAGCACCTGTTTCTGCAGTCCCCTCGACACATCGCTGTGTGCCTCCGAGGGAAGGCTCAAATCTGCAGATGAGCTGGGTAACTGTGCTGAGTGCGAGGGCCAGTGTGAGGAGCAGCAGACGTCAGGGACAGTCAGGAGGTCCCCCTCCGCTCCCTACTCCCCCTCTACAGATACCTCCACTCAAGACATCCAGTCCAAGTACCACTGTGACCTGATTGCCAAGAATGGCAGTGACGTGTACCGCTATCCCAGCCCCCTCCACGCCGTGGCCGTACAGAACCCCATCTTCTTACAGTCTCTGGCCGAACACCTCAAAGAGGATGGAGGGCTGTCAAAGAGTGGCGGCTGCATCGAGGGCTCCAGTGACTGtcagaaactggagcagcagcctATTCTGGTGCCCCAGAGCACTTCTTGGTCTGCCTCCCACTCGCCCGCTAATAAACGACTGGACAATTATATCTTCAGCCTGCTTCAGAGGAGGGCTCAGCCCATTAGGACCAACAAGCCACGGACGAGCATCAGCACAGACCCCTCCAAGAGCATCCTAAGGCAGGGTAGTCTGTGTGTGAGGCAGGCTAGTGTTGGCCAGCAGCAGCCACAGGGACTGTGGACTGCTCCTGTTACTGACCTCAAACCAACCTGGCAGACGTGTTTACATGCAGGAGGTGccagtaacaatgatccaggaaCAGGCTCCCAACAGAGACAGTGGTCAGTGGAGAGCAAAGGGGAACTCCTCTTAGAAATTGGGATGGTGTCCCAGTCTTTGGGCCAACCTCAGAACGGATATGCCACAATCAATAGCAGTGACATTCACACCAACAGCCTGGTGACCAACACCAACAGTCTGTTGAAAAAGAAGGCGCCAACCAATAAAGGACTTCCATCGTCAACCGGTCCTCTGTCTAAGGATTACCAAGACCTGGGCGCCCCCAATGCCAACTCCTCCCCCAAAGAGAGAACGCAGTCTTATTTCCCTAATGCTCAAGAGGAAAACATTACTAAACTCTCCCAGACACTGCCAAGAGACCTCACCAAAACAGGCGCACCCAAGAAAAGCCCTAAGAGCATTGCGGTCTCAGTCTATACAGCCCGGCACACTAAAGAAAAGAGGCCAATGCTGGAGCTGGTGAGTCTGGGGTCTTCCTCCCAGAGCCAGGATGAGAGTCAAGGACACATGGTCAGTGCCCAGTACATCCCCGCCCAGAGACAGGTGGTCAAGCTCCGCAAGGGGGGCAAAAACGTTAAGATTGTCAAGGTGAAGAGCGCCTCCCTGAAACCACATAGGGGGACGCACGCACATGCTGAGCCTGTATCATCAGAGATGGCGGGGACGAGGGAGAACGGTCACCGATCTGGAGGATCTAGGAAGTCTCGTCAGCCTGAGGAGGTACAACATGTGCACAAAGTCTCCTCCAAGAGGGGGGCATCTTCCAGGGCCAAGCGCACCGTCCCAGCATCTATCCCTGAGGGCCGTGTCCTAGAGAAACACATGGCCATGGTGTCTACAACAAGGTCCACTGTGACCAGGCATCACGGCTACCATGGTAGGGAGGTGGTGGTGGCCAAGCCCAAGTACAAGCGGACAAGCGGACAGGACTACAACCGTGGAAGGCTGAGAGCCATCACTGAGGTGCCTTACGACGAGGCCCTCAGGAGAGCCCACCGCAGGCAGAAGAGGGAGCTCCTCGGCCAGgtctccacaaccaccaccatgTACCTGCCCTCCAACGCGCAGTTCACCAGTCCTTACGCCTACGTGGCCGGTAGCGATTCTGAGTACTCCGCAGAGTGCGCCTCACTCTTCCATTCCACCATCATGGACACCAGTGAGGACGAGCGGAGCAACTACACCACCAACTGCTTCGGGGACAGTGAGTCCAGCCTGAGTGAGGTGGACTTTGTTGCAGAGAGCACTATCAGCAGTGACTctgaggagagtggagggatgaaCTGGCCCCAGTTTGCAGGGCAGGGCGCTGGGCCTCAGGAAGTAACCACTGCCCAGGCTAAGGCCTTCGTCAAGATCAAGGCCTCTCACAACCTGAAGAAGAAGATCCTCCGCTTCCGTTCTGCGGGCTCGCTGAAACTGATGACGACTGTATGAGGGAGGGACTTCAGGGTGTCGGGCAGGAAGCAGCGACCAATCAAAttggttgctctctctctctctgcccaacaAGTGCCTAGGCTGATTTTCTTATTTACAGAAAGTCTCTGCTAAAGTTAGTCTCAGAGACGTTTAAGGCAACATTTTAATTGGGTTTGGACAAAATGTCTGGCAGACTCCCTCTCCCTGCACTTTCTGACAAACATTGGACAGGGTGAAAAGCATCTGAGTAGCCCCATTATTTTGTTGTATGTAgccatttttttgtatttattatggactTTACCCTTGCTGTAGTACATGGCAACAAGTTCTGTAAATGCTTTTAATGGTCATGGTTTACTTTTTGATTAAAGATATTTAAACTTAATATATTTGGTTGGTATTTCTTGGATACATATTTGATTGATGATTGAAGCAGAGTATTACTTAAAAGTGGCTGTAAGGAATATTCATGCATAAAAGACAGTCTATTCTGAAAATTGAAAACTGCTGATGATACCATGGGAACACTTTTGATATATGTACACATAAGATCTGCATGAGCAACTGCTTTTCCTTCATCTGTTGTTGATACCAAGTAGCTAGCTCCAATTGTTGTATATAATGTTTATGTGTGTTAATACTGGTGCTTAACTTTTTTTTATGCACTATTAAATGTCTGCTTTAAATTCAA

Function

NR:

description
dapper homolog 1-like isoform X1

GO: NA

KEGG:

id description
K22154 DACT; dapper

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021585234.2 True 3820 mRNA 0.50 4 31446911 31459466

Neighbor

gene id symbol gene type direction distance location
LOC110505791 LOC106611240 coding upstream 155925 31287902 ~ 31290986 (+)
LOC110505794 NA coding upstream 164803 31274668 ~ 31282108 (+)
LOC110505790 LOC106611238 coding upstream 175454 31221492 ~ 31271457 (+)
LOC110505789 LOC106611239 coding upstream 226312 31214823 ~ 31220599 (+)
LOC110505788 LOC106611236 coding upstream 337885 31103284 ~ 31109026 (+)
LOC110505796 leg3 coding downstream 117017 31576483 ~ 31587632 (+)
LOC110505797 LOC106611243 coding downstream 130423 31589889 ~ 31618525 (+)
LOC118944345 NA coding downstream 180830 31640296 ~ 31642746 (+)
trnaa-ugc-181 NA coding downstream 230734 31690200 ~ 31690275 (+)
LOC110505805 LOC106602325 coding downstream 348021 31807487 ~ 31910358 (+)
G1973397 NA non-coding upstream 14347 31428447 ~ 31432564 (+)
G1973394 NA non-coding upstream 21750 31424802 ~ 31425161 (+)
G1973393 NA non-coding upstream 22277 31424335 ~ 31424634 (+)
G1973390 NA non-coding upstream 28212 31418500 ~ 31418699 (+)
G1973389 NA non-coding upstream 29966 31416739 ~ 31416945 (+)
G1973458 NA non-coding downstream 1135 31460601 ~ 31460879 (+)
G1973462 NA non-coding downstream 4539 31464005 ~ 31464286 (+)
G1973563 NA non-coding downstream 148944 31608410 ~ 31608620 (+)
G1973564 NA non-coding downstream 149892 31609358 ~ 31609657 (+)
G1973568 NA non-coding downstream 153586 31613052 ~ 31613300 (+)
G1973369 NA other upstream 59175 31387478 ~ 31387736 (+)
G1973193 NA other upstream 242920 31203615 ~ 31203991 (+)
G1973126 NA other upstream 289175 31157518 ~ 31157736 (+)
G1972252 NA other upstream 750597 30695233 ~ 30696314 (+)
G1972245 NA other upstream 766916 30659404 ~ 30679995 (+)
G1973635 NA other downstream 259058 31718524 ~ 31718968 (+)
G1973669 NA other downstream 327779 31787245 ~ 31789449 (+)
G1973717 NA other downstream 420644 31880110 ~ 31880820 (+)
LOC110510947 LOC106611254 other downstream 561839 32021272 ~ 32135673 (+)

Expression


Co-expression Network