LOC110505802 (LOC106611249)


Basic Information

Item Value
gene id LOC110505802
gene name LOC106611249
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31742814 ~ 31773610 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021585255.2
CTTCATACTGGGAATCTTATTTCCTGCGCTCTCTCACCAGGCGGCGGTAATGTACATTGACATTCCTCAAGAGAGCAGCACTTCGTCATGTATTATGAGGCTAGAACAACAACGTGTTTAACAGCCTAGAAGACGAAAGTCCACCAATTTATTTAAACAAGTGTAGCCGGTTATTCACGAGGGGAAATAAAACAACATACTTTGTCTATCATCCTGGACAGGAATTTACTAACAATCTGGTGTTGGTGAATTGTGTATCAACGCCGTTGGATAAATCACTGCCGGAAAATCTCAAGCGGTCACTTTCTAGTGCAGAAATCTTTGGAGACCCGAAAATACGTTTAATTCAAGGCATCGACTCATTCGATTGTTCAGCACTCGGCTGATTTGTGGAAGATAGCCTCATTGTGAACCAGATGATGAAAATATGACCATTTATCTTTGGATCATACTCTTCTTGGCACAAAGTAGTAGAGCAATCCCTGGACTCAGGTTTACCAAGAACCCCACCAACCTCACGGTGACCCAGGGCAACAAGGTTCGCCTGGGTTGTACCATTGAGGGCCTGAGTGAGCCGGAGATCGTGTGGATGAAGGATGGGGAGAAGCTGTACAGTACAGACCAGATGTACATCCCCCTGGAGCAACACCACTGGGAGACCTTCCACAGTGTGAAGTCTGTCCAGCAGCAGGATACAGGGAAGTACTGGTGTGAGGTAGAGTTCCGAGGCTCGACCATCTCTTCGGAGCCCGCCTGGATAACAGTAGAGGGTGTCCCCCACTTTACACTTGAGCCCCAAGACGTAGCCACGATCCCTGGCATGCCCTTTAACCTGACGTGTACTGCTGTGGGTCCCCCGGGCCCGGTGGAGGTGCTGTGGTGGCTgggaggagtacaggagggagacTTCACTTCCTCTCCATCTGTACTCCATGTTAACGGTGTTAATAACAGCATCAAGTTCTACTGTGAAGCCAAGAATGCCAGAGGTATCTCAGTATCTCGAACAGGCACTGTGCACATTAAAGTCCTCCCAGCAGCCCCTAAAGGTGTGCAGGTGGTCCACATGGTGGAGAACAATGTCACACTGGCCTGGAGCCCAGGCTTCACTGGACACTCTGACCTGTCAGCCTGCACCATCCAGATGTCTAAGAACTCTGGGAGGAAGGTGGAAGTTCGGGACCAGCGTGTGAAGGTTCCACCGTTCCAACAGATCCTCAATGGGCTGAGCTGCTACTCCAACTACAGCGTTAGAGTGTGCTGTGACAATGAGGTGGGGACATCCCCGTTCTCTGGCTGGCTGGACTTTCAGACACTAGAAGCAGTGCCCTCTGCTGCCCCTCGGAACCTGACCTTTGAACTAACTGAACAGCATCTGTCCCTGAACTGGGCGAGCTTGGATGACAAGGAGCTGCAGGGGAAACTGATGGCCTACAAAGTCCAGTGGAAcctgggaggagagggacagGAGGCGTTGCTCTTTAAAGAGAACATGGCCCACCTGTCTGGTGGAGGTCGTTTCTTCAACGCCACCTTCCAGGTGTCGGCGTGTACAGTGGCCGGCTGTGGGCCCTGGAGCCAGCCTGTACTGGTCATGCCCGCCTCAGTGGCAGCCCAGACTCAGAGAGGCCATATGTGGGTGGGTCTGTTGCTGGGCCTGCTGGTGGCCACCATGGTAGGGCTTCTCCTGACAGTCCTAGTGcaccgcagagggaaggaaacaCAGTTTGGGTCTGTGTTCAAGCCACCGGGGACTGAGAGCACggtctccttcactgcagccaggTCATTCAACAGGACCTGCTCTGAGCTCCCAGAATCCACCTTGGACAGCTTGGGTATCAACGACGATCTGAAGGCCAAGCTTCAAGACGTTCTGATCCCAGAAAGGCTACTGACCCTCGGACACATCTTGGGAAAAGGTGAGTTTGGCTCAGTGCGTGAGGCCTTCCTAAAGATGGAGGACAGCACTGTACAACAGAAGGTTGCAGTGAAGGTGCTAAAAACGGATATCAACTCATCATGTGATATTGAGCAGTGCCTGAAAGAGGCTGCTTACATGAAGGACTTCCACCATCCAAATGTCATCCAGCTCATTGGAGTGAGTTTGCACAGACGGCCTCAGCAACGGTTGCCCATCCCCATGGTTATCCTGCCCTTCATGAAGCATGGGGATCTTCACACCTTTCTGCTCATGTCCCGCCTTGGAGACGAGCCCTTTacagtgtcactgcAGATGCTCATTCAGTTTATGTTGGACATCGCTCGTGGAATGGAGTACCTGAGCAACAGAAGCATCATACACAGGGATCTGGCTGCACGCAACTGCATGCTGAGTGAAAACTTGACCGTCTGTGTGGCAGACTTTGGCCTTTCAAAGAAAATCTACAGTGGTGACTACTACAGACAAGGATCCGTCTCAAAGCTGCCTGTCAAGTGGATAGCACTGGAGAGCCTTGCTGACAATGTCTACACTACTCAGAGTGATGTGTGGGCGTTTGGAGTCACCATGTGGGAGATCATGGCACGTGGACAGACCCCCTACCCTGGGGTGGAGAACTCTGAAATCTACGAGTACCTCATCAAGGGAGAGAGGCTCAAACAACCACCTGACTGCCAAGATGACATGTACGAGATCATGCATAGCTGCTGGAGCCCTGTTCCCAAGTGCCGCCCAAGTTTCCAGCACCTGATTGACCAGCTGGAGGGGCTATGGGCCAGCCTGTCCTCAGGGCCTAGTTTTATGAAGGAGGCCCTTCTCTACGTTAACCTGGAGAGTGACGAGGGGGCGCCAGGGGCACTGGGCCCAGGGGAGGGCCCCTCGTGGTCAGCAATGCCCTGGCAGTGTGTGGGAATGGAGGAGGATGAGAAAGACTGGCTCATGGTGTCTTCTGGGGCAGCTCTGGCTATTGGTGGAGACTACCGCTACATCATTGGCCCTAACTGCAACTGTACtgaagaggagagtgggaggcagGGGGACTCAATGGATACCTTGCAGCAAGAAGTCAGGGATGAGGAATATGAAGACACGATCATTAATGTGTGATTTATATTTTGAACAACATGCCTGCTCCTCTGCCCTACAGATTTCAAACTGACCAGTTGGTTGTGGATGGTTGGTCACTCACTACTGCCCTCCAGTGAAGTTTCTGAAAACAGCTGCTTACCAGCATTTCTTGGATTGAAGTGCATATCTCAATGAACCTTTCTACCCATTTTATTGCCAGTCATATGCAGTGTCATTTTGTACTTTAAACTAAGGActtcacattgacacacacaatCAGCCTTATGATTACATTCAACAAAGAACAATAACACTACTGATATTTAAAATGGTACATTTGACTGATAAACAGAACTTTATAATGGAAAATTCTATAGTATTATGCATCTTTTGAAGTTTAGGCATCATTTGATTATAAAAGCAGTCCCTATGTCCTTAGTGTACACTGTACTGTAGGTGGTAGGTATTGAACATTGGTATTTGCTGCTTTGCTAACGAACTCCCTTATCTCTATGATAAGCATCTTCTGTCCAAAAGTGTGCTACACGTTCTTAATCTGTATTCTCATTTAACCTTAGAATAACATTACACGGGACCACCACTGTAATAATCCCCTAACATTGTGACTGAGTTATTtagaattataaactgggtgttttgagcactgaatgctgattggctgacacccGTGGTGTATCAGACcctataccatgggtatgacaaaacttgtatttttactgctctaattatgttggtaaccagtttataatagcaataaggcagaCCTCAGATgtttggtatatggccaatataccacacctcctcatgcTTTGTTTAAGTATACCATTGAGAATTTATGGAAACAGGAATATATTCAGAACATTGTTTATGTATTTAAGAAGAATACCAGAGTGAGCATGGATATGTGTTAAGACATTAGCCTGATGAAATGTGAGCTTGTCGTTCACTGATGTTCAAAGTGCTTACACACACCCTTGATTTTGCTTTTGGAGCATTCCATGTATGGGATATCAAGGGACATGTTTTAATATTTTAAATTTAATTTTTTGTATGTTGTGTTAAAATTATTTCCAGAGATATGACCTAGAGCATTAAACAGAGACTTATGAAGCTGGTGCTTTGTGTTGTGATTCTCTCTGTCCAGTCCATCCCTACCAGCAGGTTTATAGTTGTTTTAGATTTGTGCATCAAGCTACAATGTAAGTCTCACCTGAAGTGTAAGTAAATAAAGTATTGGTTGTTTGTGATCGTA
>XM_021585254.2
ACTTCATACTGGGAATCTTATTTCCTGCGCTCTCTCACCAGGCGGCGGTAATGTACATTGACATTCCTCAAGAGAGCAGCACTTCGTCATGTATTATGAGGCTAGAACAACAACGTGTTTAACAGCCTAGAAGACGAAAGTCCACCAATTTATTTAAACAAGTGTAGCCGGTTATTCACGAGGGGAAATAAAACAACATACTTTGTCTATCATCCTGGACAGGAATTTACTAACAATCTGGTGTTGGTGAATTGTGTATCAACGCCGTTGGATAAATCACTGCCGGAAAATCTCAAGCGGTCACTTTCTAGTGCAGAAATCTTTGGAGACCCGAAAATACGTTTAATTCAAGGCATCGACTCATTCGATTGTTCAGCACTCGGCTGATTTGTGGAAGATAGCCTCATTGTGAACCAGATGATGAAAATATGACCATTTATCTTTGGATCATACTCTTCTTGGCACAAAGTAGTAGAGCAATCCCTGGACTCAGGTTTACCAAGAACCCCACCAACCTCACGGTGACCCAGGGCAACAAGGTTCGCCTGGGTTGTACCATTGAGGGCCTGAGTGAGCCGGAGATCGTGTGGATGAAGGATGGGGAGAAGCTGTACAGTACAGACCAGATGTACATCCCCCTGGAGCAACACCACTGGGAGACCTTCCACAGTGTGAAGTCTGTCCAGCAGCAGGATACAGGGAAGTACTGGTGTGAGGTAGAGTTCCGAGGCTCGACCATCTCTTCGGAGCCCGCCTGGATAACAGTAGAGGGTGTCCCCCACTTTACACTTGAGCCCCAAGACGTAGCCACGATCCCTGGCATGCCCTTTAACCTGACGTGTACTGCTGTGGGTCCCCCGGGCCCGGTGGAGGTGCTGTGGTGGCTgggaggagtacaggagggagacTTCACTTCCTCTCCATCTGTACTCCATGTTAACGGTGTTAATAACAGCATCAAGTTCTACTGTGAAGCCAAGAATGCCAGAGGTATCTCAGTATCTCGAACAGGCACTGTGCACATTAAAGTCCTCCCAGCAGCCCCTAAAGGTGTGCAGGTGGTCCACATGGTGGAGAACAATGTCACACTGGCCTGGAGCCCAGGCTTCACTGGACACTCTGACCTGTCAGCCTGCACCATCCAGATGTCTAAGAACTCTGGGAGGAAGGTGGAAGTTCGGGACCAGCGTGTGAAGGTTCCACCGTTCCAACAGATCCTCAATGGGCTGAGCTGCTACTCCAACTACAGCGTTAGAGTGTGCTGTGACAATGAGGTGGGGACATCCCCGTTCTCTGGCTGGCTGGACTTTCAGACACTAGAAGCAGTGCCCTCTGCTGCCCCTCGGAACCTGACCTTTGAACTAACTGAACAGCATCTGTCCCTGAACTGGGCGAGCTTGGATGACAAGGAGCTGCAGGGGAAACTGATGGCCTACAAAGTCCAGTGGAAcctgggaggagagggacagGAGGCGTTGCTCTTTAAAGAGAACATGGCCCACCTGTCTGGTGGAGGTCGTTTCTTCAACGCCACCTTCCAGGTGTCGGCGTGTACAGTGGCCGGCTGTGGGCCCTGGAGCCAGCCTGTACTGGTCATGCCCGCCTCAGCAGTGGCAGCCCAGACTCAGAGAGGCCATATGTGGGTGGGTCTGTTGCTGGGCCTGCTGGTGGCCACCATGGTAGGGCTTCTCCTGACAGTCCTAGTGcaccgcagagggaaggaaacaCAGTTTGGGTCTGTGTTCAAGCCACCGGGGACTGAGAGCACggtctccttcactgcagccaggTCATTCAACAGGACCTGCTCTGAGCTCCCAGAATCCACCTTGGACAGCTTGGGTATCAACGACGATCTGAAGGCCAAGCTTCAAGACGTTCTGATCCCAGAAAGGCTACTGACCCTCGGACACATCTTGGGAAAAGGTGAGTTTGGCTCAGTGCGTGAGGCCTTCCTAAAGATGGAGGACAGCACTGTACAACAGAAGGTTGCAGTGAAGGTGCTAAAAACGGATATCAACTCATCATGTGATATTGAGCAGTGCCTGAAAGAGGCTGCTTACATGAAGGACTTCCACCATCCAAATGTCATCCAGCTCATTGGAGTGAGTTTGCACAGACGGCCTCAGCAACGGTTGCCCATCCCCATGGTTATCCTGCCCTTCATGAAGCATGGGGATCTTCACACCTTTCTGCTCATGTCCCGCCTTGGAGACGAGCCCTTTacagtgtcactgcAGATGCTCATTCAGTTTATGTTGGACATCGCTCGTGGAATGGAGTACCTGAGCAACAGAAGCATCATACACAGGGATCTGGCTGCACGCAACTGCATGCTGAGTGAAAACTTGACCGTCTGTGTGGCAGACTTTGGCCTTTCAAAGAAAATCTACAGTGGTGACTACTACAGACAAGGATCCGTCTCAAAGCTGCCTGTCAAGTGGATAGCACTGGAGAGCCTTGCTGACAATGTCTACACTACTCAGAGTGATGTGTGGGCGTTTGGAGTCACCATGTGGGAGATCATGGCACGTGGACAGACCCCCTACCCTGGGGTGGAGAACTCTGAAATCTACGAGTACCTCATCAAGGGAGAGAGGCTCAAACAACCACCTGACTGCCAAGATGACATGTACGAGATCATGCATAGCTGCTGGAGCCCTGTTCCCAAGTGCCGCCCAAGTTTCCAGCACCTGATTGACCAGCTGGAGGGGCTATGGGCCAGCCTGTCCTCAGGGCCTAGTTTTATGAAGGAGGCCCTTCTCTACGTTAACCTGGAGAGTGACGAGGGGGCGCCAGGGGCACTGGGCCCAGGGGAGGGCCCCTCGTGGTCAGCAATGCCCTGGCAGTGTGTGGGAATGGAGGAGGATGAGAAAGACTGGCTCATGGTGTCTTCTGGGGCAGCTCTGGCTATTGGTGGAGACTACCGCTACATCATTGGCCCTAACTGCAACTGTACtgaagaggagagtgggaggcagGGGGACTCAATGGATACCTTGCAGCAAGAAGTCAGGGATGAGGAATATGAAGACACGATCATTAATGTGTGATTTATATTTTGAACAACATGCCTGCTCCTCTGCCCTACAGATTTCAAACTGACCAGTTGGTTGTGGATGGTTGGTCACTCACTACTGCCCTCCAGTGAAGTTTCTGAAAACAGCTGCTTACCAGCATTTCTTGGATTGAAGTGCATATCTCAATGAACCTTTCTACCCATTTTATTGCCAGTCATATGCAGTGTCATTTTGTACTTTAAACTAAGGActtcacattgacacacacaatCAGCCTTATGATTACATTCAACAAAGAACAATAACACTACTGATATTTAAAATGGTACATTTGACTGATAAACAGAACTTTATAATGGAAAATTCTATAGTATTATGCATCTTTTGAAGTTTAGGCATCATTTGATTATAAAAGCAGTCCCTATGTCCTTAGTGTACACTGTACTGTAGGTGGTAGGTATTGAACATTGGTATTTGCTGCTTTGCTAACGAACTCCCTTATCTCTATGATAAGCATCTTCTGTCCAAAAGTGTGCTACACGTTCTTAATCTGTATTCTCATTTAACCTTAGAATAACATTACACGGGACCACCACTGTAATAATCCCCTAACATTGTGACTGAGTTATTtagaattataaactgggtgttttgagcactgaatgctgattggctgacacccGTGGTGTATCAGACcctataccatgggtatgacaaaacttgtatttttactgctctaattatgttggtaaccagtttataatagcaataaggcagaCCTCAGATgtttggtatatggccaatataccacacctcctcatgcTTTGTTTAAGTATACCATTGAGAATTTATGGAAACAGGAATATATTCAGAACATTGTTTATGTATTTAAGAAGAATACCAGAGTGAGCATGGATATGTGTTAAGACATTAGCCTGATGAAATGTGAGCTTGTCGTTCACTGATGTTCAAAGTGCTTACACACACCCTTGATTTTGCTTTTGGAGCATTCCATGTATGGGATATCAAGGGACATGTTTTAATATTTTAAATTTAATTTTTTGTATGTTGTGTTAAAATTATTTCCAGAGATATGACCTAGAGCATTAAACAGAGACTTATGAAGCTGGTGCTTTGTGTTGTGATTCTCTCTGTCCAGTCCATCCCTACCAGCAGGTTTATAGTTGTTTTAGATTTGTGCATCAAGCTACAATGTAAGTCTCACCTGAAGTGTAAGTAAATAAAGTATTGGTTGTTTGTGATCGTA

Function

NR:

description
tyrosine-protein kinase receptor TYRO3-like isoform X1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0007155 cell adhesion biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0004714 transmembrane receptor protein tyrosine kinase activity molecular_function

KEGG:

id description
K05116 TYRO3, RSE; TYRO3 protein tyrosine kinase 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021585255.2 False 4283 mRNA 0.48 19 31742814 31773609
XM_021585254.2 True 4287 mRNA 0.48 19 31742814 31773610

Neighbor

gene id symbol gene type direction distance location
LOC110505801 LOC106611247 coding downstream 1337 31713399 ~ 31741477 (-)
LOC110505800 LOC106611246 coding downstream 32778 31642748 ~ 31710036 (-)
LOC110504224 LOC106611245 coding downstream 106759 31632759 ~ 31636055 (-)
LOC110505798 LOC106611244 coding downstream 110397 31622042 ~ 31632417 (-)
LOC110505792 NA coding downstream 468848 31272049 ~ 31274777 (-)
LOC110505803 LOC106611250 coding upstream 2137 31775747 ~ 31779780 (-)
LOC110505804 LOC106611251 coding upstream 18221 31791831 ~ 31806245 (-)
LOC118944338 NA coding upstream 406114 32179724 ~ 32183313 (-)
LOC118944262 NA coding upstream 501057 32274667 ~ 32291847 (-)
LOC110505809 vrk1 coding upstream 1152257 32925867 ~ 32950891 (-)
G1973855 NA non-coding downstream 67498 31674954 ~ 31675316 (-)
G1973836 NA non-coding downstream 122834 31619783 ~ 31619980 (-)
G1973837 NA non-coding downstream 135166 31607439 ~ 31607648 (-)
G1973840 NA non-coding downstream 136880 31605688 ~ 31605934 (-)
G1973830 NA non-coding downstream 139829 31602780 ~ 31602985 (-)
G1973880 NA non-coding upstream 9555 31783165 ~ 31786895 (-)
G1973958 NA non-coding upstream 146804 31920414 ~ 31920621 (-)
G1973999 NA non-coding upstream 212327 31985937 ~ 31986379 (-)
G1974078 NA non-coding upstream 222390 31996000 ~ 32081537 (-)
G1974116 NA non-coding upstream 300376 32073986 ~ 32074528 (-)
G1973835 LOC106611243 other downstream 124315 31614421 ~ 31618499 (-)
G1973793 NA other downstream 157768 31584540 ~ 31585046 (-)
G1972851 NA other downstream 976881 30764956 ~ 30765933 (-)
G1972810 NA other downstream 1059411 30616588 ~ 30683403 (-)
G1972746 npas3 other downstream 1234756 30507551 ~ 30508058 (-)
G1974000 NA other upstream 212833 31986443 ~ 31986884 (-)
G1975453 NA other upstream 1546119 33319729 ~ 33324325 (-)
G1975763 NA other upstream 1782820 33556430 ~ 33556811 (-)
G1977046 NA other upstream 2704010 34477620 ~ 34478809 (-)
G1977226 NA other upstream 3101775 34875385 ~ 34876181 (-)

Expression


Co-expression Network