LOC118944291


Basic Information

Item Value
gene id LOC118944291
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 33837398 ~ 33838849 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039542.1
ctccaagacatgctaacctctcaccattacaatagcAAGGTAGGTTAGCATTTTctatcatacctccaagacatgctaacctctcaccattacaatagcAAGgtaggttagcatttttgggggggtatgatatttgtgcgtctgtaactttctcactcatcattactcACAATTAATTCAggactatctgtaatcatggtagcatccacattaatgtagaagtgtttagaaacatattctgtaattatttacaataaaagtgactccaaatgacacaacacattatttaccattaatttctgtTGGGTGCAAagtaatctgaaacacaaccaaatcaaacAGAAAATGCTTGATGTAATCACTGTGTGCTAGGaaaatgggaccaaatactaaacttttgactactttaatacacatataaatcaatttgtcccaatacttttggtcccctaaaatgggggtactatgtaaaaaaaaaaagtgctgtaatttctaaacggttcacccagtATGGATAAAAAtgctcaaattaaagctgacagtctgcaccttaacctcatagtcaatgtatcatttccaatccaaagtgctggactacagagccaaaacaacatcaaaaaatgtcactgtcccaatacttttggagctcactgtatttaCACATTTGAGATAAAGCACACATTTCATTGGGCGATGAACCTCTAGAAGGTACTACTTGTCTTACAATAATCTCTCAGTGGATTCTGCAGAGGCTTGAGACGGTGTCAGTTGTGAGGCTTGGAGGGTGTCAGTTGTGAGGCTTGGAGGGTGTCAGTTGTGAGGCTTAGAGGGTGTCAGTTGTGAGGCTTGGAGGGTGTCAGTTGTGAGGCTTGGAGGTTGTCAGTTGTGAGGCTTGGAGGGTGTCAGCTGAGAGGCTTGGAGGGTGTCAGTTGTGAGGCTTGGAGGGTGTCAGTTGAGAGTCTTGGATACGTTGGAAGTACAGTATATTAAGGCATTTTTTAAGTTTAACGATTCATTCTGTTAAATAGTTATGTTTGTATGCCTGTGGGTTGTTTTTTAAACTGCTGTGATTGATTCAGCTGTGCTTGAGCTTGTAAAAGTCCTTTTAATAAAAAGAGAATGGTTTATGAAATGtttctttagaaatgtttttttAACAATGTCTGTAATTAAGTAATGTACTAtgataaacattttatttaaatctGCTTTTGTTTTTACAGCCACCTGAATCTTCAAAATAATTCCTCCAACTAGCACAGAATTCCTATGAAATaagattgtatttgtcacatgcgccgaatacaacaggtgtagactataccatgaaatgcttatttacgatccctttcccaacaatgcagagttaaaaagtaccaaaaaatgtgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039542.1 True 1389 mRNA 0.37 2 33837398 33838849

Neighbor

gene id symbol gene type direction distance location
LOC100136218 LOC106611270 coding downstream 8217 33764320 ~ 33829181 (-)
LOC110505811 LOC106611271 coding downstream 139291 33695613 ~ 33698107 (-)
LOC118944264 NA coding downstream 162376 33672074 ~ 33675022 (-)
LOC110505810 LOC106611272 coding downstream 608123 33187619 ~ 33229275 (-)
LOC110504227 galc coding downstream 763866 33040661 ~ 33073532 (-)
LOC110505812 LOC106611269 coding upstream 985 33839834 ~ 33888222 (-)
LOC110505813 LOC106611262 coding upstream 92816 33931665 ~ 33981041 (-)
LOC110505815 LOC106611267 coding upstream 151148 33989997 ~ 34016972 (-)
LOC110504228 NA coding upstream 214702 34053551 ~ 34059575 (-)
eif2s1a if2a coding upstream 230307 34069156 ~ 34072609 (-)
G1975998 NA non-coding downstream 85729 33751436 ~ 33751669 (-)
G1975900 NA non-coding downstream 172739 33664164 ~ 33664659 (-)
G1975879 NA non-coding downstream 187214 33649954 ~ 33650184 (-)
G1975877 NA non-coding downstream 188325 33648801 ~ 33649073 (-)
G1975847 NA non-coding downstream 215122 33621971 ~ 33622276 (-)
G1976137 NA non-coding upstream 9665 33848514 ~ 33848892 (-)
G1976172 NA non-coding upstream 64685 33903534 ~ 33908448 (-)
G1976174 NA non-coding upstream 65978 33904827 ~ 33909698 (-)
G1976256 NA non-coding upstream 142514 33981363 ~ 33982345 (-)
G1976257 NA non-coding upstream 143588 33982437 ~ 33988957 (-)
G1975763 NA other downstream 280587 33556430 ~ 33556811 (-)
G1975453 NA other downstream 513073 33319729 ~ 33324325 (-)
G1974000 NA other downstream 1850514 31986443 ~ 31986884 (-)
G1973835 LOC106611243 other downstream 2218899 31614421 ~ 31618499 (-)
G1973793 NA other downstream 2252352 31584540 ~ 31585046 (-)
G1977046 NA other upstream 638771 34477620 ~ 34478809 (-)
G1977226 NA other upstream 1036536 34875385 ~ 34876181 (-)
LOC110505829 LOC106611279 other upstream 1131303 34970065 ~ 35000444 (-)
G1977346 NA other upstream 1188251 35027100 ~ 35100978 (-)
G1977392 NA other upstream 1214201 35053050 ~ 35056926 (-)

Expression


Co-expression Network