mpp5a (LOC106611266)


Basic Information

Item Value
gene id mpp5a
gene name LOC106611266
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 34073214 ~ 34117847 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036962531.1
GGAGACCCTTCACGTATGAACAACTCTCGAGTTGGAAATGACTCCTAACGCACGGCTACGGAAGAGAGGATCCGGACTGATATTGTGGCACAAAGTTAGCAAAGTTTTTTTTCGTTTTTTTAACTCAACTGATACAAAAAACAGTGGAGTAATATTGGACATGTCAATGAAGAATATATTCTCGACAGGGTTGCGGGAATAAAGTGTCCTTCCCTCCTGGAATCCCAGCGTCTGCCGAGTCATCAGTAGTGAGTTAGGGTGTCATGGCCGCTGGGTCCCGGACATGCAGAAATCACCCCTCATAGTGCTTCCCCCAGCCAACCACTTGAAAACACACacggaggagcaggagaaggagcAAGGGTGATAATGATAACCACATCCTATATGAACGGTCACATGACTGAGTCAGACGGAAGAGGAGGAGTTGAGGCCAACCAGGAGGAGCCCCAACAGTGGCACAGGGAGATGGCGGTTGACTGCCCGGGGGACCTGGGTGCCCGTACCCTGCCTGTGAGGCGCTCTGCCCAACTGGAGAGGATCCGTCAGCACCAGGAAGAccggaggaggaaggaggaagagggcaGGAACAGACAGGAGCTGGATCTGACCGCCTCCATACGGCTCAAGAAGCTGTCTCAGAACCCCAAGGTGGGCATCGATAACCCCACCTTCGACCCCATCGAGGGCCCTGGAGGGCCACCGGGACTGCCACCCAACCTGGGGGCCCCCACTCTACTGGAGTTGGAGGAGCTGCTGATGTCCCTGAAGCAGGTGCAGCACTGCCTGTCTGACGGCCAGAGCCAGGAGGACGTGGAGCTGGTGCTGCAGCTGGTCCAGAAGACTGACTTCCAGAAGGCCTTCAACATCCACAACGCTGTGGCCCAGCACATGAACAGGCCCAGCCCGCCCTTCCCACACACAGACCGCGCTCAGGGCCTGGCACACGAGGTCCAGTCTATGGTTCATAACAGCCAACACACGGAGGGTTTGGAGCTCAACACCCTGCTCTCCTCACCACATGTCCAGGCGGTGCTTCTGGCCCATGACTGTGTTGCGGAGCAGGAGATGCAGCTGGagcccctgacccctgacccctgtgaGGCTCTCACCCAGTGGGGAGGGGAGACTGTCAAGATAGTCCGCATGGAGAAGGCCAGGGACATCCCACTGGGTGCGACAGTGCGTAACGACATGGACAGTGTGGTAATAAGCCGCATCGTGAAGGGCGGTGCGGCGGAGCGCAGCGGGCTGCTGCATGAAGGAGACGAGGTTCTGGAGATCAACGGAGTGGAGATCAGAGGGAAGGACGTCAACGAGGTCTTCGACATCCTGGCCGAAATGCACGGAACCCTGACCTTCATCCTTATCCCCAGCTCACAGAACAAACCCCCGCCCATCAAAGAGACTGTGGTCCATGTGAAGgctcactttgactacgacccgTCTGATGACCCCTACGTGCCGTGTAGGGAACTAGGCCTGTGCTTCCAGAAGGGAGACATCCTCCACATCATTAGCCAGGACGACCCCAACTGGTGGCAGGCCTACAGGGACGGAGACGAGGACAACCAGCCCCTGGCCGGGCTAGTACCAGGCAAGAGCTTCCAGCAGCAGAGAGAGGCCATGAAGCAGACCATAGAAGAGGATAAAGAGCCTGAGAAGTCGGGAAAGCTGTGGTGTGctaagaagaacaagaagaagaggaagaagctcCTTTACAACATCAAGCAGAATGATGACAACGACAGTGAGGAGATCCTGACCTATGAGGAGATGGCGCTCTACCACCAGCCAGCCAATCGAAAGCGACCCATCGCCCTGATTGGTCCTCCCAACTGTGGGCAGAACGACTTGAGACAGAGACTGCTGTCTAGCCAGCCAGACAGATTTGGGGGAGCAGTCCCACACACGACACGGAACAGGCGTGATGTAGAGGTGAGTGGGAGAGACTACCACTTTGTCTCCCGCCAGGCCTTTGACATGGACGCCACTGCAGGGAAGTTCATTGAGTCGGGAGAGTTTGAGAAGAACCTGTACGGAACCAGCACTGACTCTGTCCGCCAACTCATCAACATGGGCAAGATCTGCCTGCTCTGTCTGCACACACAGtcGTTGAAGACTCTGCGTAGCTCGGATCTGAAGCCTTACATTATCTTCATCGCTCCTCCCTCCCAAGAACGGTTGCGAGCCCTCCTGACCAAAGAGAGCAAGAACCCAAAGCCAGAGGAGCTGCGTGACATCATCGAGAAGGCCCGTGAGATGGAACAGAACTTTGGCCACCTGTTTGATGCAGCCATCGTGAACACAGACCAGGACAAGGCCTATCAGGAGCTGCTGAGGCTGATCAACAAACTGGACACAGAGCCACAATGGGTCCCCTCCTCCTGGCTACGCTAAGGGCCGGGGCAGTATAACACACCCACAATGCTAACCTGACTAGAGCCCTGTAAAATCTGCAATGCACAGAAAGTGAATGGAATCACAGAATCAATACATTGAAACATAATTCAACAATATGCTAACATTTATTGAACTTTGTAGgcaatcaactaaatgtattgaaaatgtattaattttcCCACGtttatcataagacatgaacagaatgcatcagtgattcttATTTCCTGTAAGTTTCTGAATAAGCAAAGATAATTCCTCGTCTGTATGTGCAGTGCGTGCGTTTACCACTTTGTGTAGCCATTAGCAATGATGCTAATGAAaagtcttctggtagatggaaaggctttcccaaaaaccttcatttaaatgttaactacaaagtagcctatgctgacctggcagaattatattatttgcatcaatccagtgggtatttgttttgcaaactctgtCATCGCATGCGAGCTACAAATacactgctaaacaacagcctcttgctagcactggaattaaagggtaactacaccacCCGAAAatgaacataaaaaaaataaaaaatcctagaCATCAAAAGTTGTCTCCCGATGTGGTTTGAGCATTGTTATGGACTTAAAACATCCAATTTAGTTGTTTTATATTTtaaaaagtgtgattttgagagtgaaaacctgAAAAAACAAGGGGAAATGGAAATCTGGAAAAACTAAAAGGAGAAAACGGTATTGGGGAAAAACTAAATGGAAtcttacattatttttttttaaatgttaaaaaTTGTATAGGGCCCTACCTGATACGCACACAACGCTGAAGATTTGCCTTGACTCAATTCTCCAACCACAGTCTCTGTGTGAGACTGGAGGTAGATCCTCAATCACCACAAGCTGAAGATTAATGAAACAGTTACAGCTCTTATCACTATTATGCTGAACTGAACTCTTCAATTCACTTCTGAGACTGCCTGGGGAAATTAATTTGATGTATTATTGCTCTGATAATTTGTcctttttccttttttttgtttCTGTATTTCTCTTCACTAAATGAACTATTCACATTCCAGGTAGGAAGTATGTAAAGACGTGGCACTTGTGGCAGAAATATAATTAATGCTTCTATCCTGCTTTAGATAATTATTTATAATTGTAAATATATTGTATTTTAAATAAGTTTTCAAAGATGAGAAGAAGAACCCATAGCTTCTATGTATGAAATATTATTATCCAGTCAGTGAATGTCTCTCCTACATTACACAGAGGTTGTTGTACCCATGCTCTGTCCGTGTGTGAGGTCAGGTGTGTCTGTGTTCTCTAATGTCGAACTGACATCACTCAGCCATAGTCTGGAGTGTTGGCAGTAAGGTGCCTCTGATCTCTAACATAGCAGATGGGAATGGGATTAGGCTACTACAAGTATCATCATGGATGGGATTTGTTCACCTAATGAAACTATCTGTGAGGTGATCACACCCAGGTGTCGGATTACATTATCTCAGCATCTGGGCTCTCTTTCCACTGCAGCAGCCCTGGTTTCAAGTACAATTTGaataatttcaaatactttagctgtgcttgattgaaCAATAGAATTGTCCCACAAGTGCAAACCCTAcccccatctggcactccaggtagATGAAAGCAAAACCTGAAAGTATTTGAATTATTTCAAatgctatttgaacccaggtcagcACTACCCTACAGCACAGCACAATGCTGGAGGTTTATCTAACTGGTGTTTTGACATAACAATAATTAGATCTGAGAGGTGCTTAAGAGTCAGTGCCTCATTCTAATCTACTTGCCTTATACCCTTTTCAAACTATCGTGCCAATCAACACTACTGTGCTGGCTCTgatattttattttcacattgtCCTCCAGCATGGTCTTAAACTATGGTGGGTCATAACCAGGCCAGTTCAGGTCATAATTGGCTTAGTACTAGAGGATAATAAACTAGCCCTAACACCACCTCTCACCCAAGCGCTATAGGGTGTATTTAttacgttttgcaacagaaaccaTTTACAGTTTTAAGAACCAAACTGAACCAAATGGTACTAaatggggagggacctacctgaatttgtccaatagacaTTTTGTCGTTCCAAAGCGTTTTCCGTTTGTAATAAATGGTTTCTGTTGCTAAGTGCTTTGCAACAGACTAAAAATTTTACAACAGAATCTGCATAAATAATATACCCCTGGTCATAACTAAATACAAAAAACTGTCCTGTCCAGAATCCCAGGATTTAAAGCAACATTTATGATAATGAATAAAGATTATTAGAGGTgtttaaaagtttggacactaaACCCTCCTGGGGTAGTTTTAGTTTTATCTCAGTATTCATCATGTATAGTTCCTGTGTTACTCTGTAGGAGTGTAACCATAGTGAATGTAACCAGTACTATTCTATTCACAGAAAACACTAAAGAGTATCTGAGCACCGCTGTCTGTGGGATTATATTAAATGCATTTTCTAATTCACTCAGATTCATTATGAACGATCCATCTATGCTGTATTTTTAATCTGATGGTTTTCACCACAGGTGATATTTAAATGTGTGACATACATCTGTGTTTTGTTTTCAGAGCTGTTATTGAAATGAGTCTGTGAAATGAACTTGAATGAACCGATAAGCCTAAATGCGGGGAAAAATAGCCtacaattacatttttaaaaaaaatatgttttgttgcaTATGTTCATAGGTTGGagctcacgtgtgtgtgtgtgtgtgtgtagaggcagAACTCACTGAAATGCAGGCAAGTATTATCTCTAGTAGACACAATGGGGAAACATTGTCTTCTTCGTCTTAACAACGATCTGTTTCACATATTATAACACCATTTTAATTTGGGTTATTATTGATGATATTGTGGTGTCTAGATATTTGACATTGATATACATGTAATgttaaaaatatatgtattatGTACAGAGTAATGCACTTGTAGAATGATCACTCTGCCACCCTTCCATCCCTTCATATTGCTTCTGGAACCAGAACTGAGGTTCTGCTGGTACTGTCTCCATGACCCCTTCAATTcaagcctgatcccagatctgtttgtgttctaCCCAACTCCTCTGACTTTCTGTCATGTATGCCATAGTCAGAGGAGTTTGTAACAATTGGCTTTATTTATTGTCTCGGAGTTGGAGAACAGATCTAGGACCTTGTCATCTCTGTCCATATAATATTATTCATTATAATATATCTTCAGTCTGTGCAGTACACACCTTGTGTAGATGTTGAGCTGTTTATTGGAAGTAGAGTTGTTGAATGTAAGGTTACTatactataaaaaaaaaagtttttattcCTGTAAATCTGTTTTTGTAGGAATTATTCATGTAAATTAAAGACCAGATTGATAGAA

Function

NR:

description
LOW QUALITY PROTEIN: MAGUK p55 subfamily member 5-A-like

GO: NA

KEGG:

id description
K06091 MPP5, PALS1; MAGUK p55 subfamily member 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036962531.1 True 5805 mRNA 0.45 12 34073214 34117847

Neighbor

gene id symbol gene type direction distance location
eif2s1a if2a coding downstream 605 34069156 ~ 34072609 (-)
LOC110504228 NA coding downstream 13639 34053551 ~ 34059575 (-)
LOC110505815 LOC106611267 coding downstream 56242 33989997 ~ 34016972 (-)
LOC110505813 LOC106611262 coding downstream 92173 33931665 ~ 33981041 (-)
LOC110505812 LOC106611269 coding downstream 184992 33839834 ~ 33888222 (-)
gphna LOC106611263 coding upstream 329 34118176 ~ 34235545 (-)
LOC118944181 NA coding upstream 49613 34167460 ~ 34168258 (-)
LOC110504230 LOC106611223 coding upstream 174621 34292468 ~ 34442343 (-)
pth2 NA coding upstream 581322 34699169 ~ 34700207 (-)
rin3 LOC106611275 coding upstream 597881 34715728 ~ 34739802 (-)
G1976821 NA non-coding downstream 4754 34068280 ~ 34068460 (-)
G1976333 NA non-coding downstream 7285 34064699 ~ 34065929 (-)
G1976331 NA non-coding downstream 8998 34063919 ~ 34064216 (-)
G1976307 NA non-coding downstream 23045 34049926 ~ 34050169 (-)
G1976257 NA non-coding downstream 84257 33982437 ~ 33988957 (-)
G1976857 NA non-coding upstream 26600 34144447 ~ 34145605 (-)
G1976866 NA non-coding upstream 48774 34166621 ~ 34167074 (-)
G1976872 NA non-coding upstream 63396 34181243 ~ 34181870 (-)
G1976896 NA non-coding upstream 108857 34226704 ~ 34227635 (-)
G1976897 LOC106585398 non-coding upstream 110011 34227858 ~ 34228499 (-)
G1975763 NA other downstream 516403 33556430 ~ 33556811 (-)
G1975453 NA other downstream 748889 33319729 ~ 33324325 (-)
G1974000 NA other downstream 2086330 31986443 ~ 31986884 (-)
G1973835 LOC106611243 other downstream 2454715 31614421 ~ 31618499 (-)
G1973793 NA other downstream 2488168 31584540 ~ 31585046 (-)
G1977046 NA other upstream 359773 34477620 ~ 34478809 (-)
G1977226 NA other upstream 757538 34875385 ~ 34876181 (-)
LOC110505829 LOC106611279 other upstream 852305 34970065 ~ 35000444 (-)
G1977346 NA other upstream 909253 35027100 ~ 35100978 (-)
G1977392 NA other upstream 935203 35053050 ~ 35056926 (-)

Expression


Co-expression Network