LOC110505840 (LOC106611332)


Basic Information

Item Value
gene id LOC110505840
gene name LOC106611332
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 36112357 ~ 36120256 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021585297.2
GTTGGTCACATGCCTTGTTCCTATTGTCTGCAGCAGAGAGAAGGGTGTGTACTGGGGAtgtgggctggctggctgacggcagTGTTTTCTAGCAGTGGTGGCGCAGCATCCTTTGTATCATGTAGCCTTGGTGCGGTGCGTGCGGATTAAGGGTGGAGACAGTTATCGTTGCCAGGATCAAGGATATTCATCAGTCGGAGGAAGTACATGTAGTCTACGTGGTATAGGCTATGTCCGTGTGATTAGGTGTGCCCAAGTACAGAATGTTACCATTTTCTGCGAGAGCTATGAATTGGCTTACCTGGGTACCGCTCGGCGGAGGATGCTTCGAGAAAGAGGGGCAACATGAGTCATGATGCGCGATTAACGACAGATACAGTGGCTTTTAATTGTGTTGCGGAGAAATCAATTTTTATGGTCAAGGATCAAAGGAATAAATATGTCGAGACCGAAACCGTGCGAGGCAGTAAAGGTAGTGGTGCGATGCCGCCCTTttaacaggagagaggagactatGGACAACGATAACATATTGGATGTGAATTCAAAACTGGGCCAGATCACATTGAGGAACCCGAGGGCGTCACCTGAAGAAGTCATGAAATCGTTCACCTTTGATGCGGTCTACGACTTTGAGTCGAAACAGAGCGATATTTATGACGATACCGTCAGACCTCTTGTAGATTCCGTGTTACAGGGATTCAATGGTACAATATTCGCATATGGACAGACTGGGACAGGTAAAACATACACGATGCTAGGTATGCCCACAGACAATGAAAGAGGGATCATCCCAAATTCATTTAACCACATTTTTACACAGATCTCCAGGTCTCAGAATCAGCAATATTTAGTGAGGGCATCCTATCTAGAGATCTATCGGGAGGAGGTCAGGGATCTGTTATGTAAAGACAACAAGAAACTAGATCTCAAAGAGAACCCAGATTCAGGGGTTTATGTCAAAGATCTGTCTTCGGTTGTCACCAAGAATGTGATGGAGCTCGAACATGTCATGAACATAGGAGATGAGTCCAGGTCTGTGGGGTTCACCAATATGAACGAACGCAGCTCGCGGTCCCATGCCATCTTCATGATCACGGTGGAGTGCAGTGAGAAAGGTGCAGATGGAGAGGACCACATACGGGTTGGGAAGCTGAACATGGTTGACCTGGCTGGCAGCGAACGCCAGAGCAAGACGGGTGCTAAAGGGGAGCGCCTGAAAGAGGCCACTAAAATCAACCTGTCCCTCTCAGCACTGGGTAATGTCATCTCAGCTCTGGTGGATGGGAAGAGCACCCACATCCCTTACAGGGACTCTAAACTGACCCGTCTACTCCAGGATTCACTGGGTGGCAATGCTAAGACAGTCATGGTAGCCACTCTGGGACCAGCGTCCAAGCACTATGAAGAATCCCTGACCACCCTACGGTACGCAAACCGAGCCAAAAATATAAAGAACAAACCCAAAATCAATGAGGATCCAAAGGATGCTCTGCTGAGAGAGTTCCAGGAGGAGATTGCCCGCCTGAAGGCCCAGCTGGAGGAGCGAGGGACGCTggcgaaggagaggaggagaaggaggaatagCAGAAGGCTGACTAAAAGTATGATTGttgaggatgtagcccacagagAAAGGGATGCAGAGCTGTGGAAGGCACTGGAAGCAGAATGGAAGCGGAATGAGGAATACTATATAAAGGAAGAAGAAGAAAGCAAGATGATAGAAGAGGATGAAAAGGGGGTAGAGAGATTCAACTCCATGGATAACTCTGTAGAGGCCAGTCCCCAAAAAACTGTAACCTCCAGAATACCGATACATAGATCTGTGGATGATAGCCCCAAAAAGGCTTTTCCCACCAGCACCCATAGCAGCCCAGGGGCCAGAGAGAAATGGAAGCCATTTGGTGAAAAAGAACAGATGGAAAAGGAAAGGATGATGGACGACATGCAGAAGGAACAGGAAGCTATGGAAAAGATTATTGAGAAATATAAGGCAATGGAGAGCAAAATATTGGCTGGGGGAAAGAACATTATTGACCACACTAATGAGCAACAGAAGATGCTGGAATTGAAGAGGCAAGAGATTGCAGAACAGataagacgggagagagagatccAGCAGCAGGTGATGGCTCAGGATGAGGAGACGGGAGAGCTGAGAGAGACCTTCTCCTCTCTGCAGCAGGAGGTGGATCTCAAGACCAAGAAGCTAAAGAGGTTGTATGCCAAGCTGCAGTTGGTGAAGGCAGAGATTGGGGATGTCATTGATGAGCATGTAGTTACTAGACAGGAGCTTGAGCAGACACAGAATGAACTCACCAGAGAACTCAAGTTCAAGTATCTCTTAATTGAGAATTTCATCCCTCCCAAAGATAAGAACAAAATTATGAACCGGCTTCACTTTGACAGTGACGAGGACCAGTGGAGGTTTAGGCCCTTCGTTCCTTCCGAAAGTAAATCGTCCCAACAGGTGAAGCGAAGGCCCACGTCTGTGGTGGGATACAAGAGACCAATCAGCCAATATGCACAGATGGCTGTCACAGCAGGAGCTCCATGTCGATACCGGGCTGAGAATGTGATGCTCCTGGAGCTAGATATGAGCCCACCCAGCATGTACAACCTCAACCTTAACGGAGCACACCTGGAACAGAACTTTGGAGGTCACggcagtcccaggagagacctgctAGCCAACGTCCCATTCAGGGACAGGACCACTGCATCAGGAAGGGTCCGGAAGTCACGATCCTGGTACCAGGCACCACGCTCATCCTCTTCATGCGTCTCATCCTCTTCATCATCCAGCTCTATAACATCAGGGCCCCCGACCCAGTGCTCTCCTCACCCCCAGAGACCCTCCTCAGCCATATACACTCCATTGGAAGGTTCCATTCCAGGGGGTCCCTGAGTCCAGATTCTAGAACATTCCAACATTCCAATGTATATCATATATGCTTATTTGCTAGGTCGAAAATATACAGGTTAGGACAATGTAATAATTCCATGCAGCAGTGTTAGAAAATAAACAATTTCATTGGACCAGCGCCTACAGGATTAGCATAAAAAAATGTGACCAGTGGCCAGGAAATCAAGTAGTAAAGTGACTGTAGATCATTTGAAACGTAGATAATTTAAACGTTTGAATTAATAGAATGACAGTAAAACAGTTATGCTATGTGTTTGATGAGTAGTTAGCTGAAATGTACTACGATTGTGGTTATTTTCCAAGTTTGATGACAAACTTTCTGTACTGCTAACATTCACTTCCAGTCATGTTCACTCGCATTGCTAGCAATGAGGTACAATAGATTGCTAGTCCCATTGTTTATAATCCTTTTGCATTTATAGAGACATTCATGGGATTTTAGAATCCTCTTGTCCTAACCTGTATATCTGACCTGTCTGCATTATCAACAATTTCATAGTGTATTATTTCACCAAACACAATTGGTCTGTAACCAAAAGTAATTAGCATTTGTGGAAAATATTGCACCGCTGAACTTTGACTAAAGTATATGACTAAAGTAATGTTTAGCTTTTGATGTACAGAAACATCAGAATAAATGGTACAAACTGTTACATAA

Function

NR:

description
kinesin-like protein KIF3B

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0007018 microtubule-based movement biological_process
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005524 ATP binding molecular_function
GO:0003777 microtubule motor activity molecular_function
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K20197 KIF3C; kinesin family member 3C

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021585297.2 True 3587 mRNA 0.46 8 36112357 36120256

Neighbor

gene id symbol gene type direction distance location
LOC110505842 LOC106611334 coding upstream 146 36101284 ~ 36112211 (+)
LOC110504338 LOC106611336 coding upstream 15283 36094469 ~ 36097074 (+)
LOC118944336 NA coding upstream 188423 35920875 ~ 35923934 (+)
LOC110505837 LOC106611304 coding upstream 231930 35876443 ~ 35880427 (+)
LOC110504235 LOC106611305 coding upstream 245570 35864570 ~ 35866787 (+)
LOC110505839 LOC106611331 coding downstream 134 36120390 ~ 36150603 (+)
LOC110505843 LOC106611333 coding downstream 31159 36151415 ~ 36212745 (+)
LOC110505844 LOC106611330 coding downstream 102365 36222621 ~ 36282138 (+)
LOC110505845 dpyl5 coding downstream 173447 36293703 ~ 36314438 (+)
LOC110505846 LOC106603641 coding downstream 194590 36314846 ~ 36322426 (+)
G1978081 NA non-coding upstream 83715 36028113 ~ 36028642 (+)
G1978079 NA non-coding upstream 87319 36021808 ~ 36025038 (+)
G1978102 NA non-coding upstream 92070 36016262 ~ 36020287 (+)
G1978101 NA non-coding upstream 92398 36015942 ~ 36019959 (+)
G1978098 NA non-coding upstream 108951 36003055 ~ 36003406 (+)
G1978181 NA non-coding downstream 100500 36220756 ~ 36221108 (+)
G1978249 NA non-coding downstream 239448 36359704 ~ 36359947 (+)
G1978280 LOC106611324 non-coding downstream 313881 36434137 ~ 36434672 (+)
G1978312 NA non-coding downstream 371795 36492051 ~ 36492958 (+)
G1978368 NA non-coding downstream 587243 36707499 ~ 36708827 (+)
G1978080 NA other upstream 84620 36026533 ~ 36027737 (+)
G1976689 NA other upstream 1381046 34730027 ~ 34731311 (+)
G1976680 NA other upstream 1408463 34701980 ~ 34703894 (+)
G1976575 NA other upstream 1630436 34481519 ~ 34481921 (+)
G1976574 LOC100194703 other upstream 1631078 34480904 ~ 34481279 (+)
LOC110505847 LOC106611313 other downstream 269015 36376220 ~ 36824709 (+)
LOC110504241 dnah14 other downstream 1098005 37161387 ~ 37222396 (+)
hivep2b LOC106611354 other downstream 1144524 37264780 ~ 37311200 (+)
G1980026 NA other downstream 1600878 37721134 ~ 37729904 (+)
G1980792 NA other downstream 2408351 38528607 ~ 38529105 (+)

Expression


Co-expression Network