hivep2b (LOC106611354)


Basic Information

Item Value
gene id hivep2b
gene name LOC106611354
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 37264780 ~ 37311200 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021585354.2
TTCTCTGGTGACTAGCTCACATCAATAGATCTCCTAATGTACGCTCAGTCAGCCAGCATCAGCGGCTGCAACGTCTGATTGATACGATTTTACCCTCGCTAAATCTGATCATAATTGCTTATGCTATTACTATAGCCCAGGGATGTGGAGAATGGACAGCTGTAATTTGCAATATGAGGAATGTGACATGTGACTGGCGATGTGGGACAAGAAGAGAGTATACTAATGTCAGATGACCCTTTCCTGCAACCAGTGTACATCTGCGAATATTACTACTACAGTAACATAACAGACTTTATCATCTGTAGGAAATCAACCCTGAAGAGGAAGGTGACATTGGAATCGTCATGGAGTCACTAGAAACTACTGCAGAGGTGAAAAGCTCTAAAGAGGCTCTGAATAAGACAGTTCCCCAGAGAAAGTCAGCAGCACCAGAACCTATGATTGCCCAAACTAAAATACCCCCCTCGGCTGATTCGGAAGGGGAGGGGTGGCATCTATGCCCAGAACCTGAGGAGGACCAGAGTAGAACCACATATTGTTCAACAGATATGTCTGACTCAGGGAAACTCAGACAATTAGAAGGGAAATCACTACGCCAATTACAGGATCAACCCTGCAGTCATCCTCATTACAACGTATTAACCTCATATCCAccacaggagagacagacagttccCTTTGCTAGACAGAAAACAGCAGATCACTTGCTTTCTGCACTGCCACTTGTCAGCTGTGGAGGGCCCTCTCCTCAGAGGAGCTCCCCCAGTTTACCCGTGTCTCTCCAACACTGTTCCCAGTCAGGAATAGAGGAACTATCCAAGGAGGTGTGTAGTAAGATGGAGCAGAAGCAGCAACAGAGACCTGGGAAGTATGTTTGTGATTATTGTGGGAGGGCATGTGCCAAACCCAGCGTACTTAAGAAGCATATTCGCTCACATACTGGGGAGAGACCCTACCCCTGCGTGCCCTGTGGTTTCTCCTTCAAAACCAAGAGCAATTTATACAAACACAGAAAATCTCATGCTCACTCGGTCAAAGCTGGGACAGTGCCATTTTCAGAACTGGGTTCTTACAATGTCAACATGGAGGACCGGGGATCTttagaaggagaaggagagttcTACTCTGATGCTGAGCAGAGCTCGGACACGGACGAAGATGATTCATCGCTCTTGGACACTGTTTCAGTGGAGGAACCAGATAGCACCACTGCTGTTAAAGTACTGAATCTCATTGCCCAGAAACAGGGAGTTACATTAGCATCAACATTATCTGAGGACGGTTCACCCAGGCTCTTGGAGATCAATGCTGCTCCAGCTGTTTCTCAGGTCAGCCATGCAATCCAATCCAGCGCCATCAAGCAGAGGCTGGCACTCCGGCTCTCAGAGAAAAGGAGCAGTGACACTGAcacatctctctccctgcctAGCCAGGGAAGCAAAGGCAGCACAGACTCAGGCTACTTCTCACGCTCTGAGAGTGCTGAACACCAAACAGGTGGTCCTCCCAACACAAACGCCAAGTCCTATCAAGAGATAATGTTTGGAAAGTGTTACAAGCCGAACCCGAAACAACAGGCCATAACTGTTGTGACTTGCAGGACAGACTTAACGAGTGATCGTAAGACATCGGAGCGAGGTGTTTCCCGCGTATTCACACAAGAAAAGGAATCAATGGTTGAATCGATCAGAATAAACACACATTCATTTACAAGGGAGGACATTAAGGAGGCTCAACTAGAGCTCTCTGATTCTGGACAGCTGGTCCGGAGCAACTCGATGCCCACGTCCTCGGTGGCATGTCAGGACATGTCACAAGGCCTGCGAGGCAGCCACTCCTTTGATGAAAGGGCGTCCCCTGGAGGCATTAGGAGACTTACGAGACAGGCTGCCTTTGAACACTCTGCACACGATGGACCTCATGACCACTACGGAAACATCTCTGATATTTCCAACCTCGGAGTGGAGGTGGACAGTTTCATCATCCAACAAAAGCAAGCGATGGAATATGCGACGAGGAAACGGCGAAAGGAAAAGTGTGTtgcggaggaggaggatgtaggaGGCCAGTATCACACGGACTGTGACCACTCTGAAGAGATGAGGGACTATGATTCAAAGCAAACCTCGCAAGGTGCTCTAACCACTACATCCTCAGTGAAAGGACATGCCCAAAGCGTTCACACACAGGATAGATCACAACGTGATAGACTGGAAAGGGAAAtgtgggaaaagagagagagagaagagagaagatctTTAGGTAACGTCATCTCTGTGATTCAACACACTAACTCCCTTACCAGGTCTCTCTCTGAACAGTCAGATTCTTACAACTACCGGGATAAGCCGTCCTCAATGGAGGTGGTGGAGCAAAGCGAAACTAGAGAGATGCACAAAAGGACTGAGATCTTTGCACACCAGTTGAGTGACAGTAGATTATTAGATAAGTCGTATCAAATGACACCTAAGCTAGTCCGTCAGTCTAACATACCGGTCCCAGAGATCAGGGTGACTGTAGAACCAGACAGTCCAGAGAAAGAGAAATCAGCTGAGGTGAAACAGGTGAAGGCGAAGGAGCCCGATAGACATATAGAGGAGTTCCAATGGCCTCAGAGGAGTGAAACCCTGTCTCAGTTCCCCCCAGAGAAACTCCCTCCGAAGAAGAAGAGACTGCGCTTAGCTGACTTGGAGCACTCCTCTGGCGAGTCTAGCTTTGAGTCGGCTTGTACGAGCCTCTCCCGGAGCCCCAGTCAAGACAGCAACCTATCCTACTGCTCCAGCTTCTCGTTTGAccgagaggagaaagagagagaggttatccCCAAGCCAGCTTCCCCGGCGGCTAGACAGGATGAGTTTGGCAAAGCATTGGAGTTCTTAGCGGTGCCAGGAAGCGGctactccctctctgtcctgAACCAACGTCAACAACATGAAATGAGACGTACCTCTTCAGAACAGGCACCGTGCCACTCCCAGTGCAGAGAGCTCCCAGAGGTCCGCAGCGTATCATTTGACTACGGCAGTCTCTCTCCAACGGCCAAAGTTAGACATGCGGAACTCAGCGCCAGCTACTCGGAGCCCAGACGGAGTAACTTGGTAAGACAGGAGTCCTTGAATGTTAACCTTGAATTTGCACATCCAGTCCTTCCGCTAAATATTCTTCCTCAGTACCTCAGCAGTGCCCTGTCGTTCTCATCCACCGCTCTGCACTCTCAGTGTCTGCCAATGTTCTCCCCTCAGCCGTCACACTCTGGTCTCCTAGTTCCTGTTAGAATCCAGACTCACGTGCCATCCTATGGTAGCATCACATACACCACTGTGTCCCAAATTGTAGATGATCCGTTCGAAAGCGTTAACTCCACCAGAACCTCTTTACTCACTTCTCACTTCGCAAATTTAGCCACGAATTTGGATACATCTAATATATTATTAGGACACCCTCGAGGACTGTTGACCAGCCCAGTCCAGGTTCACGTTCTAGATCTGCCCCCAGCTAAGCTGAAGACAggcatccctctctccctgacctcCAGGACGATCTCCACCACCAACTGTGGGTCCAGTGGTGGATCCAACAAACGCATGTTGTCTCCGGCCAGCAGCTTGGACCTGTTCATGGAGGTCAAACAGCAGAAACGCGTCAAAGAGGAGAAAATGTACGGTGAGATAGTGGAGgagttgggtgctgtggaattAGGGAATTATAATGTGACTGAAGAGAACAAGCACAGTTTAAAGTCAGAGTTTCAAAGTGACACCAACCAGGGAGCATCACTGTCAGGCTTTCCTTCAAAATCCTCTTTGTCTGTCTCATCAGCGCTTCATTCTCATAACGAGCCAGCAAGTGGAAGCTTCGTCTCACCTCAGCAACAAGGGTCAGAAAGTCCTGATTCCCCTATGGATAACTCGCCAACAGAAGCAAGCCTACATCCACATGCTCTGCTTTCTCTAAAGGATTTCAATGAGTCTGGCATGGACAGCAAGGCACAGATGGAGGTGCTGGTGCAGCTAGTCAAAGGTCAGGGCATCCTCATCTCAGACGGGGAAAACACCAAACGGATATCTCAATTTCCAAGTCTCCGCACAATGACAGCTGTGAGTTGGTGCTATCTGAACTACACCAAGCCAAACAGCACTCACAGCagctctcccctgtcctctgtgTACGCTACGTGGTGCATCAGTTCCCATAACCCCAACCCTCCTAACCTCAACACCAGTGCCACCTTGGCTCTGCTCCGCTCCAAACAGACGACTAACACATGGGTGTACACCATGGCTGCCATGTACCAACCTGGGACTGGGAAGCTGGTCTCCTCCTCACTCTTATGGAGGCAGAGGCTCGGGCTGCTACAGAGCAAACCGCAGCTCAAAGAGCTGGAAGGGAGCTCCTATGGGAGGAAAGTGAAGGATGCCAGCTGCAGGGTAAAAGCCGGGAAGGAGGactggaaagagagggaggtctCCTCGAAACAAACAGCAGtgccaacaccaacaccaacaccaacatcaACACCAACCCGGATAAAAATATTTGAAGGAGGGTTCAAGTCTAATGAGGACTATGTGTACGTGAGGGGCCGAGGCCGGGGGAAGTATATCTGTGAGGAGTGTGGCATTCGCTGTAAGAAACCCAGCATGCTGAAGAAACACATACGCACCCACACTGACGTCCGGCCCTACGTCTGCAGGGTCTGCAACTTCGCTTTCAAAACTAAAGGAAATCTGACCAAGCATATGAAGTCAAAGGCTCACATGAAGAAGTGTCTTGAGCTTggtgtgtcagtcacagtggatgATACAGAGACACTGGAATCTGATGACATCCAGCAAGACTTGAAGACCGGGGTCTTGAGCTCAGCCAAACACCAGTTCTCAGACGCAGACGACTCCGATGGCATGGATGAAGAGATCGACGATATCGACGAAGATGACGAGGACGAGGACGACTACGACGGTGACTCTACTCCCAAGATCCTTTCCCGGAGCACCAGCCCTCAGCCCTGTGGCGTAGCCTCTCTGTCGGTCACAGCTGCCGCTGTCATCCAGGGTGTGTCGTCAGACGTCCATGGCTGTCCCCTCAGTTCCTTCCATCCCCTCCCCAGCTGCCTCTCAACCTACACCCTGCCTAGCGTCGATATCCACCCCCATCCCACCTCCACCCTGTCAGGCATCGATGTCcacccccatccccatcccccctcCACTGTCAGGAGGACAGGGCCAGACCGGAGGACTGTCTTGGCCTCCAGCCTGGACAAGGAAGACTGTAGCCTGGCCATGCTGTCTCCTGACCAGGGCTGTCTGTTCTTTGACCCCTACCCCACCTGTCTGCTGTCCCCCGGCTGGGAGTCCCCTCTGAGGGAACCGCCTAACTCCCGCCTCGGCTACCCCTCAACCCGGAGAGACCTCTCCCCCCGGGGACGCTCCTCACCTCGATGGGACACCTCCCCGCTGAGGCCAAGCTCCCCCAACCTCACCCCCATCCAGCACCTCTTTCCGGCCTGTATGGAGAGGCCCCTGTCCCCAGGTGGAGTGGACCTGGctgggaggagacagagggtggTGCTCAGGGCTGTGTCTCCACGTAGAGGGGGCTCACAACATAGAGACTCTGGGGATAAAACCAGGCAGCAAGCCAAGGCTGAACTGGTCCAGCAGGGAGAAACCATTGAAATGGATATGGATCAGAGGAGAAGcgtgcctccctgcctgcctgggtCCGCCTGCTCCAGTTGTCCTCGTCAGAACCTCTTCAGCCACCTCCCCCTACACTCTCAGCAGCAGGCTGGGACTCTCCTACCCATGGTGCCTATCGGAGGGATCCAGGTACTGCGCTCTCTGCCCTCCTGCAGCTCTGACCGGACCCATCTGTCAGCCCTATCCCCTCAAAAGACTGAGCTCCACCAGGACAGCACTAAGGAGGGATCTGTTCGTCTGGCAGCCCTCGGTGCAGAGGACTCAGGAGCCCGGcagcaggggagggagagggggatggagagggagatggagagggagaccgggatggagagggagaggctgtCCCCCCTCCAGACACCCCGGGACTCTGAGGAGGAGAacccccctgtctctgtcctcatgGTCAGGAACCCTAAGCAGGAAGAGGTTCTTCAGACCTGCACCAAGGCCATCGCCTCCCTCAGGATCACCTCCGAAGAGCATCTATAGACtggggttgcatcccaaatagcaccctattccctatataaagtactactgttgaccagaaggCTCTCGTCacaagtaatgcactatataaggaatagtgtaccatttggGCCTTTCCTCATATGGGACGTTCTTTGGTGCTTCCTCCAGGAGCAGCTGAGCCCCCCCATCCAACGTCCAGTCCTCAGCTAGCATGGTTCTAGATCAATTAGCGATGTCTTGACAACTGCTATGGTCACGCCAACTTCTCTGGTCACAtatgagttggcaagacagcacaaatagATATGGAACCAGGCTATGTCCACAGTTCCTCTCAACCTCATTCcactagacaggcagacagacagacagacagacagacagacaggcaggcaggcagacagacagacagacagacagacagacagacagacagacagacagacaggcaggcaggcaggcaggcaggcaggcaggcaggcagacagacagacagacagacagacagacagacagacagacagacagacagacagacagaccccatTGGTTGGGTGTTGGGGGATTCTTCTCTCAGTTTCAGTTACTTCAGGTTTCTTCATGTTAGTAATGCAACGTTCATGTGTCTTAACATTCCCCTCCCCTCACCATACGATGATCTATATCTGAGAGGAAAACAAACCTTTAAAAACAGAGACTTTATACTCTCTATGAATTTTTTTGAACTTTTAGGTCAGTGGAGTTCCTCGCAGCAAAGGATAAGCAAGAGGACGGTTGAAGTAGTGGACACAGGTGCAATATATGGGATTTAAAGATAATGCTTCTACGTTAATTATGCTTGCATACACTTGCACACAAACAGAATCATTTATATTTATTATACCCCATAACCCAATCTTAACACATTTATTCATATAAATGCATATGTGTACTATTTTCAAAATAGGCTTGTTGTTTAAATTGTATTCATATCGAGTGATTAGTTAAGAATTTGATTCTTGGAGAGAAATTGGAAAGGAAATAACGGGGAAAgtatctaatatatatatatataatatgaaagTATTTGAAAACGGAATCTGACCAAATTTAGTGTAGACTTGCTTTTTGTCCAGTTTGGTGCTTTTGATTGAAAAGCAAAGATCTGTGCCTTTTCTTTGCTTTCTACATAATGTTTTAAATAATCGTATTAAGCGAGGAAAAAGAGAATATCACGTTTAAGGAACTTTGAATCAGAATTGTCTGGCGTGACAGTGTTATTATCAACAAAGAaattgcacaaaaaaaaaaatttgctTTTACTTTGTGGAATTAAATTGCTGTTTTTCTAGCTACattttatgtaaaatatatctaTTTGACATATTTGTTATGTTGCAGATTCTCAATGTTGTGTTTTTAGCTTTTTGAACAAACGCATGAGTTTTTGCTATTGCACAAATAGAGAAGTGCATACGTTTACTGTAAGATGTCTTTATATATTAGAAAAGTATGCTTTTATTGCTGATGGTAAATATTTGTCTACTATTTATATGCTGTATATGATCTCCACTTATGCAACAGTGTGTCTCACTGACCCATGCTCATGAGATGCTTGTGAGAGGCTTGTGAGAGGCTTGTGAGATGCTCATGAAGTCACGTCCATGCATTATAACTTATGGCTTTAAGCAATCGTTGTTCGTTATTCTGGCCTTTGAACCTTTTTGTGAATTTAAATAAGCACTTTCATCCTAACTTTTATATCTGACTGAGATGGTTATTAAggagaaataaaaaaacaatcatg
>TU2261916
taGTGTGACTAattaaggcactgtatgtggattTATATTTTGTTATCTTAATAATAAGACTGTATATGTCTCATTTCAATTGCCAGTTGTGGTCTATGTTTACAAGAGTCGTACATTCTTATGATTGTGCCAACTGCCAAGTTTACCTTAATGCGTAGGCGATCTTTTTGTAGATTTGAAAAATTAGAATTTTTAAATAGTACGAAACAGTATGTATAGGGTAACGGCTTCTATGTATGCTTAATGGACCATGTAGAGAGGGTGATTGAATCGAAACTGACGTCTCCCAAATGGCTTCTTGTCTTGTGCACTACCTTTTGACCTCtgctatgtagtgcactacttttcaccagggcccataagtctctggtcaaaagtagtgcactatatagggaatagtgtaccatttggGCCTTTCCTCATATGGGACGTTCTTTGGTGCTTCCTCCAGGAGCAGCTGAGCCCCCCCATCCAACGTCCAGTCCTCAGCTAGCATGGTTCTAGATCAATTAGCGATGTCTTGACAACTGCTATGGTCACGCCAACTTCTCTGGTCACAtatgagttggcaagacagcacaaatagATATGGAACCAGGCTATGTCCACAGTTCCTCTCAACCTCATTCcactagacaggcaggcagacagacagacagacagacagacagacagacagacagacagacagacagacagacagaccccatTGGTTGGGTGTTGGGGGATTCTTCTCTCAGTTTCAGTTACTTCAGGTTTCTTCATGTTAGTAATGCAACGTTCATGTGTCTTAACATTCCCCTCCCCTCACCATACGATGATCTATATCTGAGAGGAAAACAAACCTTTAAAAACAGAGACTTTATACTCTCTATGAATTTTTTTGAACTTTTAGGTCAGTGGAGTTCCTCGCAGCAAAGGATAAGCAAGAGGACGGTTGAAGTAGTGGACACAGGTGCAATATATGGGATTTAAAGATAATGCTTCTACGTTAATTATGCTTGCATACACTTGCACACAAACAGAATCATTTATATTTATTATACCCCATAACCCAATCTTAACACATTTATTCATATAAATGCATATGTGTACTATTTTCAAAATAGGCTTGTTGTTTAAATTGTATTCATATCGAGTGATTAGTTAAGAATTTGATTCTTGGAGAGAAATTGGAAAGGAAATAACGGGGAAAgtatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021585354.2 False 7965 mRNA 0.49 7 37294754 37311200
TU2261916 True 1200 TUCP 0.40 3 37264780 37310451

Neighbor

gene id symbol gene type direction distance location
LOC110505880 LOC106611353 coding upstream 22431 37266281 ~ 37272323 (+)
dnajc5gb LOC106611352 coding upstream 31218 37254375 ~ 37263536 (+)
tp53i3 tp53i3 coding upstream 40563 37248933 ~ 37254191 (+)
cenpo LOC106605279 coding upstream 48373 37239979 ~ 37312637 (+)
LOC110504241 dnah14 coding upstream 72358 37161387 ~ 37222396 (+)
txlnbb LOC100194689 coding downstream 7483 37318683 ~ 37336104 (+)
oct2 LOC105015417 coding downstream 34038 37345238 ~ 37361366 (+)
trnal-cag-30 NA coding downstream 75823 37387023 ~ 37387105 (+)
LOC118944270 NA coding downstream 161256 37472456 ~ 37475572 (+)
LOC118944390 NA coding downstream 265803 37577003 ~ 37577147 (+)
G1978600 NA non-coding upstream 158759 37135512 ~ 37135995 (+)
LOC110505874 ankrd66 non-coding upstream 163041 37124643 ~ 37131713 (+)
G1978571 NA non-coding upstream 221455 37071806 ~ 37073299 (+)
G1978563 NA non-coding upstream 254539 37039579 ~ 37040215 (+)
G1978525 NA non-coding upstream 296132 36996357 ~ 36998622 (+)
G1978721 NA non-coding downstream 77679 37388879 ~ 37397108 (+)
G1978752 NA non-coding downstream 136690 37447890 ~ 37451403 (+)
G1978753 NA non-coding downstream 140574 37451774 ~ 37452001 (+)
G1978754 NA non-coding downstream 142876 37454076 ~ 37454543 (+)
G1978755 LOC106611355 non-coding downstream 146149 37457349 ~ 37457645 (+)
LOC110505847 LOC106611313 other upstream 899538 36376220 ~ 36824709 (+)
G1978080 NA other upstream 1267017 36026533 ~ 36027737 (+)
G1976689 NA other upstream 2563443 34730027 ~ 34731311 (+)
G1976680 NA other upstream 2590860 34701980 ~ 34703894 (+)
G1980026 NA other downstream 409934 37721134 ~ 37729904 (+)
G1980792 NA other downstream 1217407 38528607 ~ 38529105 (+)
LOC110505893 dio2 other downstream 1254678 38565810 ~ 38575881 (+)
G1981068 NA other downstream 1725166 39036366 ~ 39094814 (+)
LOC110505902 LOC106611388 other downstream 2232920 39543907 ~ 39557667 (+)

Expression


Co-expression Network