Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110505960 |
| gene name | LOC106611458 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 41677344 ~ 41737128 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036962636.1 | False | 5177 | mRNA | 0.56 | 29 | 41677344 | 41737128 |
| XM_036962638.1 | False | 6154 | mRNA | 0.52 | 28 | 41677345 | 41732243 |
| XM_036962637.1 | True | 6156 | mRNA | 0.52 | 28 | 41677346 | 41732243 |
41,640,000
41,650,000
41,660,000
41,670,000
41,680,000
41,690,000
41,700,000
41,710,000
41,720,000
41,730,000
41,740,000
41,750,000
41,760,000
NC_048589.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505964 | LOC106611459 | coding | upstream | 11282 | 41636156 ~ 41666062 (+) |
| LOC110505965 | trim9 | coding | upstream | 54549 | 41547371 ~ 41622795 (+) |
| LOC110504259 | LOC106603281 | coding | upstream | 326595 | 41297432 ~ 41350749 (+) |
| si:ch211-132f19.7 | LOC106611404 | coding | upstream | 786232 | 40868101 ~ 40891112 (+) |
| dnajc27 | LOC106611405 | coding | upstream | 817290 | 40829046 ~ 40860054 (+) |
| LOC110505959 | LOC106611457 | coding | downstream | 3045 | 41740173 ~ 41757394 (+) |
| LOC110504274 | LOC106611444 | coding | downstream | 44143 | 41781271 ~ 41937779 (+) |
| LOC110498275 | sos2 | coding | downstream | 208371 | 41945499 ~ 42020153 (+) |
| LOC110505968 | LOC106591812 | coding | downstream | 316990 | 42054118 ~ 42059358 (+) |
| LOC110505969 | LOC106591813 | coding | downstream | 322567 | 42059695 ~ 42063783 (+) |
| G1983584 | NA | non-coding | upstream | 15638 | 41661201 ~ 41661706 (+) |
| G1983583 | NA | non-coding | upstream | 21607 | 41655249 ~ 41655737 (+) |
| G1983533 | NA | non-coding | upstream | 49254 | 41626068 ~ 41628090 (+) |
| G1983569 | NA | non-coding | upstream | 75600 | 41601327 ~ 41601744 (+) |
| G1983565 | NA | non-coding | upstream | 85811 | 41591125 ~ 41591533 (+) |
| G1983630 | NA | non-coding | downstream | 17493 | 41754621 ~ 41755446 (+) |
| G1983614 | NA | non-coding | downstream | 21487 | 41758615 ~ 41759925 (+) |
| G1983663 | NA | non-coding | downstream | 110831 | 41847959 ~ 41848335 (+) |
| G1983673 | NA | non-coding | downstream | 126504 | 41863632 ~ 41917571 (+) |
| G1983499 | NA | other | upstream | 228004 | 41448402 ~ 41449340 (+) |
| G1983387 | NA | other | upstream | 460592 | 41215475 ~ 41216752 (+) |
| G1983277 | NA | other | upstream | 629442 | 41047551 ~ 41047902 (+) |
| G1982355 | NA | other | upstream | 1286937 | 40389658 ~ 40390407 (+) |
| G1983721 | NA | other | downstream | 325897 | 42063025 ~ 42103896 (+) |
| G1983777 | NA | other | downstream | 495112 | 42232240 ~ 42232904 (+) |
| G1983836 | NA | other | downstream | 525099 | 42262227 ~ 42262714 (+) |
| cn112 | cn112 | other | downstream | 682032 | 42419107 ~ 42454007 (+) |
