Item | Value |
---|---|
gene id | LOC110513290 |
gene name | cdc25b |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048589.1 |
NCBI id | CM023243.3 |
chromosome length | 47542702 |
location | 45608087 ~ 45627239 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
cdc25b | Predicted to enable protein tyrosine phosphatase activity. Acts upstream of or within positive regulation of mitotic cell cycle; regulation of G2/M transition of mitotic cell cycle; and regulation of mitotic cell cycle, embryonic. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including DEL; anterior neural keel; axis; nervous system; and optic vesicle. Human ortholog(s) of this gene implicated in autosomal recessive polycystic kidney disease; cervical cancer; endometrial cancer; prostate cancer; and urinary bladder cancer. Orthologous to several human genes including CDC25B (cell division cycle 25B). |
id | name | namespace |
---|---|---|
GO:0006470 | protein dephosphorylation | biological_process |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036962554.1 | False | 5143 | mRNA | 0.48 | 10 | 45608087 | 45627239 |
XM_036962555.1 | False | 5099 | mRNA | 0.48 | 9 | 45608089 | 45627239 |
TU2271950 | False | 677 | lncRNA | 0.39 | 3 | 45626241 | 45627217 |
TU2271949 | True | 831 | lncRNA | 0.40 | 2 | 45626349 | 45627217 |
45,608,000
45,612,000
45,616,000
45,620,000
45,624,000
45,628,000
45,632,000
45,636,000
45,640,000
45,644,000
45,648,000
NC_048589.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110505982 | NA | coding | upstream | 330095 | 45257481 ~ 45278077 (+) |
mrps26 | mrps26 | coding | upstream | 485312 | 45117175 ~ 45122775 (+) |
dctn1b | dctn1 | coding | upstream | 564411 | 44921935 ~ 45043676 (+) |
slc39a8 | LOC106591239 | coding | upstream | 729408 | 44848143 ~ 44878679 (+) |
zmp:0000000662 | LOC106594207 | coding | upstream | 778823 | 44781600 ~ 44829264 (+) |
ap5s1 | ap5s1 | coding | downstream | 16654 | 45585850 ~ 45653481 (+) |
LOC110512895 | LOC105015915 | coding | downstream | 375340 | 46002579 ~ 46035412 (+) |
fgfr3 | fgfr3 | coding | downstream | 1156286 | 46783525 ~ 47007189 (+) |
nsd2 | whsc1 | coding | downstream | 1557870 | 47185109 ~ 47256115 (+) |
asmt2 | LOC106611414 | coding | downstream | 1674451 | 47301690 ~ 47404080 (+) |
G1986709 | NA | non-coding | upstream | 19434 | 45587514 ~ 45588653 (+) |
G1986657 | NA | non-coding | upstream | 72509 | 45534967 ~ 45535578 (+) |
G1986643 | NA | non-coding | upstream | 121008 | 45486866 ~ 45487079 (+) |
G1986628 | NA | non-coding | upstream | 133270 | 45474179 ~ 45474817 (+) |
G1986623 | NA | non-coding | upstream | 138711 | 45469129 ~ 45469376 (+) |
G1986738 | NA | non-coding | downstream | 14918 | 45642157 ~ 45642701 (+) |
G1986751 | NA | non-coding | downstream | 66963 | 45694202 ~ 45695201 (+) |
G1986784 | NA | non-coding | downstream | 149116 | 45776355 ~ 45777257 (+) |
G1986790 | NA | non-coding | downstream | 155522 | 45782761 ~ 45784738 (+) |
G1986803 | NA | non-coding | downstream | 193669 | 45820908 ~ 45821796 (+) |
G1986676 | NA | other | upstream | 55826 | 45551691 ~ 45552261 (+) |
G1985349 | NA | other | upstream | 409350 | 45167947 ~ 45198737 (+) |
G1985341 | LOC106611468 | other | upstream | 464726 | 45139650 ~ 45143361 (+) |
G1985304 | NA | other | upstream | 542949 | 45064508 ~ 45065138 (+) |
G1985151 | NA | other | upstream | 908287 | 44698446 ~ 44699800 (+) |
G1986701 | NA | other | downstream | 28050 | 45655289 ~ 45657304 (+) |
G1986839 | NA | other | downstream | 277463 | 45904702 ~ 45906237 (+) |
G1986924 | NA | other | downstream | 500728 | 46127967 ~ 46128518 (+) |
G1987065 | NA | other | downstream | 873284 | 46500523 ~ 46500868 (+) |
G1987081 | NA | other | downstream | 879883 | 46507122 ~ 46508601 (+) |