G1937290


Basic Information

Item Value
gene id G1937290
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 1055867 ~ 1065270 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2216485
ggatggattctaaacaacgtttgccatgtttctgtcaatattatggagctaatttggaatatttttcgccgttttcgtgactgcaatttccgggcgatttctcagccaaacgtgaagaacaaatggagctatttcgcctacaaaaataatattttgggaaaaaatgaactttggctgtctacctgggagtctcgtgagtgaaaacatccaaagttcatcaaaggtaaacgatttaatttgattgcttttctgatttccgtgacaaggttgcctgctgctagcaaggcatcaTGCTATGCTAGgctatcgataaacttacacaaatgcttgtctagctttggctgtaaagcatatttagaaaatctgagatgacagggtgattaacaaaaggctaagctgtgtctcaatatatttca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2216485 True 416 lncRNA 0.38 2 1055867 1065270

Neighbor

gene id symbol gene type direction distance location
LOC110505218 LOC106610622 coding upstream 45690 985484 ~ 1010255 (+)
ccdc32 LOC106610623 coding upstream 86785 963874 ~ 969082 (+)
LOC110505208 NA coding upstream 374964 676823 ~ 680903 (+)
tpp1 tpp1 coding upstream 384524 661718 ~ 671343 (+)
LOC110505206 LOC106610665 coding upstream 467658 355483 ~ 588209 (+)
LOC110505219 LOC103138747 coding downstream 192864 1258134 ~ 1266505 (+)
rtraf LOC106610620 coding downstream 685942 1751212 ~ 1761182 (+)
ptger2a LOC106610617 coding downstream 854863 1920133 ~ 1944546 (+)
LOC110505224 LOC106610616 coding downstream 1009681 2074951 ~ 2135741 (+)
LOC110505226 LOC106610612 coding downstream 1100384 2165654 ~ 2284336 (+)
G1937270 NA non-coding upstream 27586 1023419 ~ 1028281 (+)
G1937266 NA non-coding upstream 35210 1020381 ~ 1020657 (+)
G1937262 NA non-coding upstream 39184 1016452 ~ 1016683 (+)
G1937261 NA non-coding upstream 39590 1015872 ~ 1016277 (+)
G1938310 NA non-coding downstream 374248 1439518 ~ 1439733 (+)
G1938313 NA non-coding downstream 376478 1441748 ~ 1442042 (+)
G1938352 NA non-coding downstream 405760 1471030 ~ 1471329 (+)
G1938566 NA non-coding downstream 559495 1624765 ~ 1624978 (+)
G1937035 NA other upstream 399950 655528 ~ 655917 (+)
G1938701 NA other downstream 740243 1805513 ~ 1806037 (+)
G1940966 NA other downstream 2674268 3739538 ~ 3739790 (+)
LOC110505250 LOC106610594 other downstream 4320755 5385664 ~ 5404183 (+)
G1943555 NA other downstream 4633748 5699018 ~ 5699584 (+)
LOC110505260 LOC106613993 other downstream 4747263 5812504 ~ 5824543 (+)

Expression


Co-expression Network