Gene
RNA
| Item | Value |
|---|---|
| gene id | G1938980 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 1952157 ~ 1952639 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2218263 | True | 483 | lncRNA | 0.37 | 1 | 1952157 | 1952639 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ptger2a | LOC106610617 | coding | upstream | 7611 | 1920133 ~ 1944546 (+) |
| rtraf | LOC106610620 | coding | upstream | 190975 | 1751212 ~ 1761182 (+) |
| LOC110505219 | LOC103138747 | coding | upstream | 685652 | 1258134 ~ 1266505 (+) |
| LOC110505218 | LOC106610622 | coding | upstream | 941980 | 985484 ~ 1010255 (+) |
| ccdc32 | LOC106610623 | coding | upstream | 983075 | 963874 ~ 969082 (+) |
| LOC110505224 | LOC106610616 | coding | downstream | 122312 | 2074951 ~ 2135741 (+) |
| LOC110505226 | LOC106610612 | coding | downstream | 213015 | 2165654 ~ 2284336 (+) |
| LOC118944310 | NA | coding | downstream | 394892 | 2347531 ~ 2352100 (+) |
| gnpnat1 | gnpnat1 | coding | downstream | 491696 | 2444335 ~ 2449070 (+) |
| rbks | rbks | coding | downstream | 752761 | 2705400 ~ 2782004 (+) |
| G1938786 | NA | non-coding | upstream | 1999 | 1926693 ~ 1950158 (+) |
| G1938754 | NA | non-coding | upstream | 21883 | 1880480 ~ 1930274 (+) |
| G1938637 | NA | non-coding | upstream | 219685 | 1701830 ~ 1732472 (+) |
| G1938609 | NA | non-coding | upstream | 291237 | 1657898 ~ 1660920 (+) |
| G1938581 | NA | non-coding | upstream | 315288 | 1635882 ~ 1636869 (+) |
| G1938983 | NA | non-coding | downstream | 421 | 1953060 ~ 1953380 (+) |
| G1938984 | NA | non-coding | downstream | 808 | 1953447 ~ 1953685 (+) |
| G1939002 | NA | non-coding | downstream | 11361 | 1964000 ~ 1964299 (+) |
| G1939025 | NA | non-coding | downstream | 25938 | 1978577 ~ 1978822 (+) |
| G1939026 | NA | non-coding | downstream | 26922 | 1979561 ~ 1979761 (+) |
| G1938701 | NA | other | upstream | 146120 | 1805513 ~ 1806037 (+) |
| G1937035 | NA | other | upstream | 1296240 | 655528 ~ 655917 (+) |
| G1940966 | NA | other | downstream | 1786899 | 3739538 ~ 3739790 (+) |
| LOC110505250 | LOC106610594 | other | downstream | 3433386 | 5385664 ~ 5404183 (+) |
| G1943555 | NA | other | downstream | 3746379 | 5699018 ~ 5699584 (+) |
| LOC110505260 | LOC106613993 | other | downstream | 3859894 | 5812504 ~ 5824543 (+) |
| G1944456 | LOC106598199 | other | downstream | 4513150 | 6465789 ~ 6467123 (+) |
