Gene
RNA
| Item | Value |
|---|---|
| gene id | G1943607 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 5675822 ~ 5676256 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2223147 | True | 435 | lncRNA | 0.43 | 1 | 5675822 | 5676256 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| col10a1a | LOC106610590 | coding | upstream | 92197 | 5577195 ~ 5583625 (+) |
| si:ch211-266g18.9 | LOC106610591 | coding | upstream | 126410 | 5541247 ~ 5549412 (+) |
| LOC110505253 | LOC106610592 | coding | upstream | 163755 | 5493396 ~ 5512067 (+) |
| LOC110504174 | LOC106561892 | coding | upstream | 185492 | 5487708 ~ 5490330 (+) |
| si:ch211-266g18.6 | LOC106610593 | coding | upstream | 205037 | 5416814 ~ 5470785 (+) |
| LOC110505259 | LOC106610586 | coding | downstream | 79302 | 5755558 ~ 5766130 (+) |
| LOC110505260 | LOC106613993 | coding | downstream | 136248 | 5812504 ~ 5824543 (+) |
| iqcc | NA | coding | downstream | 157878 | 5834134 ~ 5839930 (+) |
| LOC118944375 | NA | coding | downstream | 308432 | 5984688 ~ 5992380 (+) |
| grhl3 | LOC106610656 | coding | downstream | 346387 | 6022643 ~ 6038606 (+) |
| G1943567 | NA | non-coding | upstream | 48612 | 5626917 ~ 5627210 (+) |
| G1943563 | NA | non-coding | upstream | 55892 | 5619635 ~ 5619930 (+) |
| G1943505 | NA | non-coding | upstream | 153179 | 5522415 ~ 5522643 (+) |
| G1943502 | NA | non-coding | upstream | 155962 | 5519561 ~ 5519860 (+) |
| G1943501 | NA | non-coding | upstream | 167012 | 5508474 ~ 5508810 (+) |
| G1943610 | NA | non-coding | downstream | 3906 | 5680162 ~ 5680449 (+) |
| LOC110505255 | LOC106610589 | non-coding | downstream | 15786 | 5615069 ~ 5693032 (+) |
| G1943556 | NA | non-coding | downstream | 18276 | 5694532 ~ 5695850 (+) |
| G1943619 | NA | non-coding | downstream | 22211 | 5698467 ~ 5698699 (+) |
| G1943648 | NA | non-coding | downstream | 75569 | 5751825 ~ 5752062 (+) |
| LOC110505250 | LOC106610594 | other | upstream | 273040 | 5385664 ~ 5404183 (+) |
| G1940966 | NA | other | upstream | 1936032 | 3739538 ~ 3739790 (+) |
| G1938701 | NA | other | upstream | 3869785 | 1805513 ~ 1806037 (+) |
| ccdc32 | LOC106610623 | other | upstream | 4706759 | 963874 ~ 969082 (+) |
| G1937035 | NA | other | upstream | 5019905 | 655528 ~ 655917 (+) |
| G1943555 | NA | other | downstream | 22762 | 5699018 ~ 5699584 (+) |
| G1944456 | LOC106598199 | other | downstream | 789533 | 6465789 ~ 6467123 (+) |
| G1945166 | NA | other | downstream | 1267955 | 6944211 ~ 6951262 (+) |
| LOC110505283 | LOC106610673 | other | downstream | 1847625 | 7523775 ~ 7605647 (+) |
