G1943650


Basic Information

Item Value
gene id G1943650
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 5752718 ~ 5752919 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2223191
actacactctatactcctctgtaaactggtcatctctgtatacctgtcgcaagacccactggttgatgcttatttataaaaccattttaggcctcactccccccctatctgagatatctactgcagccctcatcctccacatataacacccgttctgccagtcacagtCTGttaaaaggtccccaaagcacacacatccctt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2223191 True 202 lncRNA 0.46 1 5752718 5752919

Neighbor

gene id symbol gene type direction distance location
LOC110505255 LOC106610589 coding upstream 60378 5615069 ~ 5693032 (+)
col10a1a LOC106610590 coding upstream 169093 5577195 ~ 5583625 (+)
si:ch211-266g18.9 LOC106610591 coding upstream 203306 5541247 ~ 5549412 (+)
LOC110505253 LOC106610592 coding upstream 240651 5493396 ~ 5512067 (+)
LOC110504174 LOC106561892 coding upstream 262388 5487708 ~ 5490330 (+)
LOC110505259 LOC106610586 coding downstream 2639 5755558 ~ 5766130 (+)
LOC110505260 LOC106613993 coding downstream 59585 5812504 ~ 5824543 (+)
iqcc NA coding downstream 81215 5834134 ~ 5839930 (+)
LOC118944375 NA coding downstream 231769 5984688 ~ 5992380 (+)
grhl3 LOC106610656 coding downstream 269724 6022643 ~ 6038606 (+)
G1943649 NA non-coding upstream 90 5752373 ~ 5752628 (+)
G1943648 NA non-coding upstream 656 5751825 ~ 5752062 (+)
G1943619 NA non-coding upstream 54019 5698467 ~ 5698699 (+)
G1943556 NA non-coding upstream 56868 5694532 ~ 5695850 (+)
G1943651 NA non-coding downstream 1827 5754746 ~ 5755052 (+)
G1943659 fancm non-coding downstream 25744 5778663 ~ 5780109 (+)
G1943682 NA non-coding downstream 53751 5806670 ~ 5806920 (+)
G1943683 NA non-coding downstream 54291 5807210 ~ 5807838 (+)
G1943555 NA other upstream 53134 5699018 ~ 5699584 (+)
LOC110505250 LOC106610594 other upstream 349936 5385664 ~ 5404183 (+)
G1940966 NA other upstream 2012928 3739538 ~ 3739790 (+)
G1938701 NA other upstream 3946681 1805513 ~ 1806037 (+)
ccdc32 LOC106610623 other upstream 4783655 963874 ~ 969082 (+)
G1944456 LOC106598199 other downstream 712870 6465789 ~ 6467123 (+)
G1945166 NA other downstream 1191292 6944211 ~ 6951262 (+)
LOC110505283 LOC106610673 other downstream 1770962 7523775 ~ 7605647 (+)
G1946485 NA other downstream 2265519 8018438 ~ 8019290 (+)

Expression


Co-expression Network