G1945049


Basic Information

Item Value
gene id G1945049
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 6750518 ~ 6750831 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2224730
gtgttccaatggcacgttgttgttagctaatccaagtttatcattttaaaaaggctaattgatcattagaaaacccttttgcaattatgttagcacagctgaaaactgttgtcctgattaaagaagcaatacaactggccttctttagattagttgagtatctggagcatcggtACTTGtaggttcaattacaggctcaaaatggccagaaacaaagaactttcttctgaaactcatcagtctattcttgatttgagaaatgaaggttattccaaGCGAGAAagtgccaagaaactgaagatctcgtacaaggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2224730 True 314 lncRNA 0.37 1 6750518 6750831

Neighbor

gene id symbol gene type direction distance location
LOC110505279 LOC106610668 coding upstream 4352 6740441 ~ 6746166 (+)
LOC110505277 NA coding upstream 114739 6628586 ~ 6635779 (+)
LOC110511456 LOC106568776 coding upstream 231730 6513554 ~ 6518788 (+)
LOC118944297 LOC106568776 coding upstream 257225 6490113 ~ 6493293 (+)
LOC118944298 NA coding upstream 260476 6487700 ~ 6490042 (+)
LOC110505283 LOC106610673 coding downstream 772944 7523775 ~ 7605647 (+)
LOC110505293 NA coding downstream 1196624 7947455 ~ 7981627 (+)
LOC110505295 mtfr1l coding downstream 1235355 7986186 ~ 8004937 (+)
LOC110505296 LOC106610680 coding downstream 1279099 8029930 ~ 8116516 (+)
LOC110505300 LOC106610684 coding downstream 1449533 8200364 ~ 8213907 (+)
G1945045 NA non-coding upstream 1296 6749013 ~ 6749222 (+)
G1944614 NA non-coding upstream 11082 6739111 ~ 6739436 (+)
G1944613 NA non-coding upstream 14310 6735991 ~ 6736208 (+)
G1944566 NA non-coding upstream 79532 6670579 ~ 6670986 (+)
G1944564 NA non-coding upstream 82099 6668200 ~ 6668419 (+)
G1945134 NA non-coding downstream 110713 6861544 ~ 6861795 (+)
G1945138 NA non-coding downstream 119110 6869941 ~ 6870382 (+)
G1945162 NA non-coding downstream 162868 6913699 ~ 6914134 (+)
G1945176 NA non-coding downstream 176536 6927367 ~ 6927589 (+)
G1945168 NA non-coding downstream 200899 6951730 ~ 6957219 (+)
G1944456 LOC106598199 other upstream 283395 6465789 ~ 6467123 (+)
LOC110505260 LOC106613993 other upstream 926195 5812504 ~ 5824543 (+)
G1943555 NA other upstream 1050934 5699018 ~ 5699584 (+)
LOC110505250 LOC106610594 other upstream 1347736 5385664 ~ 5404183 (+)
G1940966 NA other upstream 3010728 3739538 ~ 3739790 (+)
G1945166 NA other downstream 193380 6944211 ~ 6951262 (+)
G1946485 NA other downstream 1267607 8018438 ~ 8019290 (+)
G1947313 LOC106581772 other downstream 1847666 8598497 ~ 8598769 (+)

Expression


Co-expression Network